Solanum tuberosum (potato): 102580345
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Entry
102580345 CDS
T02981
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102580345
09123 Folding, sorting and degradation
03018 RNA degradation
102580345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102580345
03041 Spliceosome [BR:
sot03041
]
102580345
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102580345
mRNA degradation factors
5'-3' decay
Lsm complex
102580345
Spliceosome [BR:
sot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102580345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
102580345
NCBI-ProteinID:
XP_006341127
UniProt:
M0ZS84
LinkDB
All DBs
Position
Un
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLNLVLDEAVEHLRDADDPLKT
TDQKRSLGLIVCRGTAVMLVAPTDGTDEISNPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccgaaaagaaacagttttagatttggcaaaatttgttgacaagggtgtgcaa
gtcaagcttactggtggaagacaagtggtaggaacacttaaaggctatgaccaactactt
aatcttgtcttggatgaagccgtggagcaccttagagatgccgatgatcccctgaagacc
accgatcagaaacgaagtcttggcttaatagtctgcaggggtactgcagtaatgctcgtg
gctccaactgatggtacagacgagatatccaatccttttgtccagccagacggggcatag
DBGET
integrated database retrieval system