Solanum tuberosum (potato): 102580789
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Entry
102580789 CDS
T02981
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102580789
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102580789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
AAA_16
AAA_18
RsgA_GTPase
MeaB
FeoB_N
AAA_30
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
102580789
NCBI-ProteinID:
XP_006338708
UniProt:
M1BSZ8
LinkDB
All DBs
Position
Un
AA seq
405 aa
AA seq
DB search
MTGSGGNLSSNQSSVSHQAPKILLAKPGLVSAGKFNRGGPDDDSAAHRPRLPSVGSLNLL
SDTWDFLTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNEIYGFDASLPGTLPPFAIETE
ETRAMAKHCTVGIEPRVSSERIILLDTQPVFSPSVLAEMIRPDGSSTIPIISGESLSAEL
AHELLSIQLGVLLASICHIILVVSDGVHDASMWQLMSTVDLLKHGIPDPSSLTLSHPQSS
EKENRDRILDSGGEYMADPVFVHTKLCTEDLAPCNLVQLKKALTQFFCSPSFVRSENHNT
AKESQVSAVSSNVQSAGRESEFLKLFLIPSRNKDDSLKPQYESHISALWNLRDQVLSKRG
PSFSRTVSERDWVKNSAKIWEIIRNSSIIVDYCRTLQSSGMFRRI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcagtggtggaaatcttagttccaatcagtcatctgtgtctcatcaagctccc
aaaatcctattagccaaacctggacttgtctccgccggtaagttcaaccgtggtggacct
gacgatgattctgcagctcaccgtccacgtcttccctccgttggatctcttaatcttctc
tctgacacctgggatttcctcacggatcgttttctcccgtttctaacggataatacggac
tttacagtagtgggtgtgattggtcctccaggggttgggaagtcgacgataatgaacgaa
atttatggttttgatgctagtttgcctggaactcttcctccgtttgccatagaaacagaa
gaaacaagggctatggcgaaacattgtacggttggcattgaaccacgggtttcatctgaa
cggattatactgcttgatacacagcctgtttttagcccctcggttttggctgaaatgatt
agaccagatggctcatccaccatacccataataagcggtgaatctttatcggctgagcta
gctcatgaactattgagcatccagcttggtgttcttctggcatccatttgtcacattata
ttggtggtatcagatggagtccatgatgctagcatgtggcaactcatgtcaacagttgat
ttgctaaagcatgggatacctgatccatcatctttaaccctttctcatcctcaaagctct
gagaaagaaaacagggacagaattctagatagtggaggagagtacatggctgatccagtt
tttgtgcatacaaagctatgcactgaagatctagcaccatgtaatcttgttcaactgaag
aaggcactaacacaattcttttgctcgccatcctttgtgagatcagaaaaccacaacact
gctaaagagagtcaagtttctgctgtttcttccaacgttcaaagtgctggtcgagaatct
gaatttttaaaattatttctaattccatctagaaataaggatgattccttgaagcctcag
tatgaaagccacatttcagcattatggaatttgcgggatcaggttttgtcaaagagaggt
ccgtctttctcaaggactgtgtctgagcgtgattgggtgaaaaattctgccaagatatgg
gaaattattaggaattcttccattattgtggactattgcagaactcttcaaagttcaggc
atgtttaggaggatatga
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