Solanum tuberosum (potato): 102580795
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Entry
102580795 CDS
T02981
Name
(RefSeq) probable E3 ubiquitin-protein ligase HIP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102580795
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102580795
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102580795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_Vps41
zf-ANAPC11
zf-RING_16
PHD
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
102580795
NCBI-ProteinID:
XP_006358959
LinkDB
All DBs
Position
Un
AA seq
545 aa
AA seq
DB search
MSHGNRIIDMEADQQGQEFFHSAPCMFYGSIATLPQPTVHAVVPAPVNAGNIYLHHVSDH
QEGTLTYGLTQFNGIQHQHPASNPDLAISASSNHYNPYMAVPSASGDFPIPVNHGPHDRL
HTSSHNILGMNSDYGRNNHYMDDVRGSFKRKNAEGIPANLQYHHALAGSSSSVAPMIARA
HESDVSMDAASFTPPDYGGNSSSYIEDGALRSMSNRSGASGPENIARHNHNHLFQGNYIS
QTHQLPGNPWLDLQFNSNGSETQPWAWNQAAPLPYVPGGIGGCVDAGNMGLRGYHMTSSN
GGLTSFLHPPIPQGHPGLHHLPPNIQGMRGQPITFPPQMTASSSHRHLPNNSSNITTNLM
QGVVEAGPRYMPSLPNGFGLYRPHRRAIVLERNTRHQNLPNMRVLPEDGVAMLDVSGYNE
VNNPIDQHRDMRLDVDHMSYEELLALGEQIGNVTTGLSDEIIVNRLKTRSFSPPVIPCTL
ETAACLDHEADFCVICQTDYNKQETIGTLDCGHEYHAECVKKWLVVKNTCPICKSTGLSV
ERKDL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacggtaatcgcataattgatatggaagcagatcagcaaggtcaagagtttttt
cattcagcaccttgcatgttttatgggagcatagcgactttaccacagcctactgttcat
gcagtagtaccagctcccgtaaatgctggtaatatatatttgcaccatgtatcagaccat
caagagggtaccttaacatatggcttgacacagttcaatgggattcaacatcagcatcct
gccagcaatcctgacctagctatttctgcttcatcaaatcattataatccttacatggct
gttccatccgcttctggagatttccctattccagtaaatcatgggccacatgatcggctt
catacaagttctcacaacatccttggaatgaattcagattatggaaggaacaatcattac
atggacgatgtcagaggctcatttaagagaaagaatgctgaaggaattcctgcaaatctt
caatatcatcatgctttggcaggttccagttcttctgttgctccaatgattgcaagggca
catgaatctgatgtttcaatggatgctgcatcatttacaccaccagattatggaggcaat
tcatcatcatacattgaagatggagcactgagaagtatgagtaacagatctggtgctagt
ggtccagaaaatatcgcacgacataaccacaatcatttatttcaagggaactatataagt
cagacccatcagttgcctggcaatccttggttggatctgcagttcaacagcaatggtagt
gagactcaaccttgggcctggaatcaggctgctcctttaccctatgtacctggtggcatt
gggggatgtgtagatgctggaaacatgggcttgcgaggttatcatatgacatccagcaat
ggaggtttgactagttttctgcatccacccattcctcaagggcacccaggacttcatcac
ctgccacctaatattcaaggaatgagaggccagcctatcaccttccctccgcaaatgaca
gcatcatcctcacacagacacctaccaaataattcgtccaatatcaccactaacctaatg
caaggcgttgtagaggcaggccccagatatatgccctccctaccaaatggctttgggttg
tatagacctcatcgaagggctatcgtgcttgaaagaaatactagacatcagaaccttcct
aacatgagagttctgccagaagatggagtggcaatgctggatgtttcgggctacaatgaa
gttaacaatcccattgatcagcacagagatatgcgtttagacgtagatcacatgtcctac
gaggagcttcttgcactgggggagcagattggcaatgtaacaactggattgtcagatgaa
ataatcgttaaccgtttgaaaacaagatcattttcgccccccgttattccttgcaccctg
gaaactgctgcatgtttggatcacgaagctgatttctgtgtcatatgccagactgattac
aacaagcaagaaactatcggaactcttgattgcgggcatgaatatcacgcggagtgcgta
aagaagtggttggttgtgaagaacacttgccctatctgcaaatccaccggattgtcggta
gaaagaaaagatttgtga
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