KEGG   Solanum tuberosum (potato): 102581237
Entry
102581237         CDS       T02981                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03030  DNA replication
sot03410  Base excision repair
sot03420  Nucleotide excision repair
sot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102581237
   03410 Base excision repair
    102581237
   03420 Nucleotide excision repair
    102581237
   03430 Mismatch repair
    102581237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sot03032]
    102581237
   03036 Chromosome and associated proteins [BR:sot03036]
    102581237
   03400 DNA repair and recombination proteins [BR:sot03400]
    102581237
DNA replication proteins [BR:sot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102581237
  DNA Replication Termination Factors
   ELG1-RFC complex
    102581237
Chromosome and associated proteins [BR:sot03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102581237
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102581237
  Check point factors
   HRAD17(Rad24)-RFC complex
    102581237
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 Mg_chelatase AAA_lid_RFC1 Rad17 AAA_16 Viral_helicase1 RuvB_N AAA_5 AAA_11 nSTAND3 AAA_19 AAA_25 AAA_28 ABC_tran MeaB RCF1-5-like_lid bpMoxR IstB_IS21 AAA_assoc_2 AAA_24 AAA_18 DNAX_ATPase_lid AAA_30 AAA_7 AAA_3 NTPase_1 RNA_helicase KTI12 SRP54 AAA_29 DO-GTPase1
Other DBs
NCBI-GeneID: 102581237
NCBI-ProteinID: XP_006358877
UniProt: M0ZTP6 A0ABQ7VGZ9
LinkDB
Position
Un
AA seq 331 aa
MASSSSTSSGPEIPWVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM
AVVAAEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHV
KNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFA
HMRICDGVGSYLQMCGLLAKLSLVRETAKAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcatcttcttcttcgacatcatctggcccagaaatcccttgggttgagaagttccga
cccaccaaagtatccgacatcgtcggcaatgaagatgctgtttccaggcttcaagttatt
gctcgtgatggaaacatgcccaatcttattttagccggtcctccgggtactggcaaaacc
actagtatattggctcttgctcatgagcttttgggaccaaactataaggaggctgtgttg
gagctaaatgcatcagatgatagaggcatcgatgttgttagaaacaaaatcaagatgttt
gctcagaagaaagttactctaccccctggtcggcacaaaataattatcttggatgaggct
gacagcatgacatctggagctcagcaagcactgaggaggacaatggaaatatattcgaac
tccactcgctttgctcttgcctgcaatacttcttctaagattatcgaacctattcaaagt
agatgtgccctggtccgatttgcaagattatctgaccaagagatccttggacgccttatg
gctgtagttgcagcagaaaaggttgcttatgtacctgaaggtcttgaagctattatattt
actgctgatggagatatgagacaaggcttaaataacttacaagcaacacacagtggattt
ggttttgtcaaccaagagaatgttttcaaggtttgtgaccaacctcatccgttgcatgtg
aagaatatggtgcggaatgtccttgaaggaaaatttgatgatgcatgtgccggtctaaag
gcactgtatgacctgggatattcccccactgacattatcacaaccctcttccgaattata
aagaactatgatatggcagaatatgtaaagctggagttcttgaaggaaactggtttcgcc
cacatgaggatctgcgatggggttggttcatatctccagatgtgtggtctgctggctaaa
ctatcattggttcgagaaacagctaaggctgcatga

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