KEGG   Solanum tuberosum (potato): 102581372
Entry
102581372         CDS       T02981                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
sot04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102581372
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102581372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102581372
   04131 Membrane trafficking [BR:sot04131]
    102581372
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102581372
Membrane trafficking [BR:sot04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    102581372
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    102581372
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    102581372
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Vps41 WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 EIF3I Beta-prop_EML Beta-prop_WDR41 WDR90_beta-prop_4th DUF4987 Beta-prop_NOL10_N eIF2A WD40_RFWD3 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 102581372
NCBI-ProteinID: NP_001305486
UniProt: K7WTY0
LinkDB
Position
Un
AA seq 326 aa
MPSQKIESGHTDTVHDVAMDYYGKRLATASSDCTIKITGVSNSSSQQLATISGHQGPVWQ
VAWAHPKFGSLLASCSSDGKVIIWKEGTQNEWSLARVFDDHKASVNAIAWAPHELGLCLA
CGSSDGNISIFTARSEDVWETSRIDQAHPVGVTSVSWAPSTAPGSLVGSDLLNPVPKLAS
GGCDNTVKVWKLFDGTWKLDCFPVLQMHTDWVRDVAWAPNLGLPKSTIASASEDGRVIIW
TVGKEGDQWVGKVLKDFGAPVWRVSWSLTGNILAVADGNNNVTLWNEAVDGEWQPNNSRY
IKLDTFITLESRMLHHINKTLAILQI
NT seq 981 nt   +upstreamnt  +downstreamnt
atgccttcacagaagattgaaagtgggcatactgacactgtccatgatgtggcaatggat
tattatggtaagcgtctggcaacagcttcttcagactgcaccattaagataacaggggtc
agcaattcgtcttcgcagcaactggctactataagtggccaccaaggaccagtgtggcaa
gtagcttgggctcaccctaagtttggttccctccttgcttcttgttcttctgatggaaag
gtaattatctggaaggaaggtactcaaaatgagtggagcttagcacgtgttttcgatgac
cataaagcttcagtcaatgcaatagcttgggctcctcatgaattaggcctctgtttggct
tgtggatcttctgatgggaacatttccattttcacagcaagatcagaagatgtttgggag
acatcacggattgatcaggctcatccagtaggtgttacatctgtttcgtgggcgccatca
acagctcctggctctcttgtaggctctgatctgcttaatcccgtgccgaagcttgcatct
ggtggctgtgacaatacagttaaagtgtggaagctgtttgatggaacttggaagttggat
tgcttcccagttcttcaaatgcacactgattgggtgagggatgttgcttgggcccctaac
ttggggctaccaaagtcaactatcgcgagtgcttctgaagatggaagagtgattatatgg
acagttggtaaagaaggtgatcaatgggttggtaaagtgttgaaggattttggtgccccc
gtttggagagtttcgtggtcactaacaggaaacatattggctgtggctgatgggaataac
aatgtgacattgtggaacgaagcagtagatggtgaatggcaacctaacaacagtagatac
ataaagttagacacatttataacccttgagtccagaatgttacatcatattaacaaaact
ctagctattttgcaaatatag

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