Solanum tuberosum (potato): 102581377
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Entry
102581377 CDS
T02981
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102581377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sot03032
]
102581377
03400 DNA repair and recombination proteins [BR:
sot03400
]
102581377
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
102581377
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
102581377
BRCA1-C complex
102581377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
102581377
NCBI-ProteinID:
XP_015158804
UniProt:
M1BI56
LinkDB
All DBs
Position
Un
AA seq
564 aa
AA seq
DB search
MVWGLFPIDPLPGEDSYYFFNKGTYKVGRKGCDVIVNKDKGVSRIHAEILVDEMISLDQS
LKKPSNILFKVRVRDCSKYGTFLNKNLDSKEKVHEFPNRETMLKDGDLVSFGTGNATYRF
SYLSFIFFICSPKHSKTNQLITKKVSSIGASITKKWSLDCSHVLVDDSFPLSDDLIDAIV
ARKPLVQYSWVELIAGKNICTDIPSHSSHAPKLMLEGVSVKVVDPQSRECCLKGYAFLLE
PENKYKFEGRLQSLLEVGGANIASSEKVSEKNGNDRVVCVVPAGSNNFKSFSNQSSLPWV
SEIDLVSAVLSGYLDPILITSPPVLVTSSCSTDETVVADSDAETESTKSDHIAAAFCSIE
SSEHDSKGITSIHKLESVEYHNEDKCTVQIVMPRDKVYTRDTSPSSTKHIKHDGGHIPHD
DATIHDPEGGYIRRLGVKSDNTVVKEDITDQRENGKLDIIYSQDLIVRDSIMSLPVSSSS
NGGVTNFKRFRKANAPSQNSFAIFIPFSKHPYQESECKNEDVAESIKEEKKRKQMEAIAE
DLFKSEKGKKSGVAGSLHGLFARR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggcctttttcctattgatcctcttccaggtgaagatagttactatttcttc
aacaaaggtacatataaagtgggtcgaaaaggatgtgatgtcattgtcaacaaggataaa
ggagtttcaaggatacatgcagagattttagtagatgagatgatttctttggatcagtcg
ttgaagaaaccctcaaatattctgtttaaagtacgtgtaagagactgctcaaagtatggc
acattcctcaacaagaatctggattcgaaggagaaagttcacgagtttccaaatagagaa
acgatgctcaaggatggcgatctagtttcatttggaactggtaatgcaacttacagattc
tcttatctgtcattcatatttttcatttgctccccgaagcattcaaagacaaatcaactt
attacaaagaaggtttcatcaataggtgcaagtataactaagaagtggagtttggactgc
tcccatgtgcttgtagatgactcctttccactgagtgatgacctgattgatgcgattgtc
gctagaaaacccttggttcaatatagctgggtcgagctaattgcaggaaaaaatatttgc
accgatattccaagccacagttctcatgcaccaaagttgatgttggaaggagtttccgtg
aaagtggtagatcctcagtctcgggagtgttgtttgaaaggatatgcttttttgctggaa
ccagaaaacaagtataaatttgagggcaggttgcagtccttgctggaagttggtggtgcc
aacattgcttcttctgaaaaggtctcggagaaaaatggaaatgaccgtgtggtatgtgta
gttccagcaggatcaaacaactttaagtctttttctaaccaaagttccttgccatgggtg
agtgaaatagatctggtttctgcggttctatccggatatcttgatcctattcttatcaca
tccccaccagtgctcgttacctcttcatgctccacagatgagacagtggttgcagactca
gatgccgaaacagaaagtacaaaatcagatcacatcgctgctgctttctgttcaatagaa
tcttcagagcatgacagcaagggaataacttctatacacaagttagaatctgttgaatat
cacaacgaagataagtgtactgttcaaatagtgatgcctagggataaggtatacacgagg
gacacatctcccagttcaacaaaacatattaaacacgatggaggtcacataccacatgat
gatgctaccatccatgaccctgaaggtggttacatcaggcgcttaggcgtcaaaagtgat
aatacagtggtaaaagaagatatcacggatcagcgggaaaatgggaagttggatatcata
tatagccaagatttaattgttagagattctatcatgtcattaccagtctcttcttcatca
aatggcggagttacaaattttaagcgcttccgtaaggcaaatgctccatcccagaatagc
tttgcaatcttcattccattctccaagcatccataccaagaatctgagtgtaagaatgag
gacgttgctgaatctattaaagaagagaaaaaaagaaaacagatggaggcaattgccgag
gacctgtttaagagtgaaaagggaaaaaaaagtggtgttgctggttccctgcatgggttg
tttgctcgtagataa
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