Solanum tuberosum (potato): 102581881
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Entry
102581881 CDS
T02981
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102581881
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102581881
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102581881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_3
PHD_NSD
DUF2921
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
zf-P11
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
102581881
NCBI-ProteinID:
XP_006351940
LinkDB
All DBs
Position
Un
AA seq
569 aa
AA seq
DB search
MGMAKRLYFLRLKRRNYGVLFRILFSLWFILGRIFPVMGVRPLRERYRSWGDEWLLVRKD
ENELGPFSAWNITGTYRGSWRFLDSTNSSSKFPDFRKSNGNSVLELISNPTKITGVHYVQ
GAIIFHDVFDNEHGVGGAQIRVEGVYIWPFRQLRMVAYSGKDGEFGQEDDYLLSNPYHLL
GVFSSQIFQESSRDKIWKKKHSPFYEMEKNCNIEIAAQIARVSSSSNDGARDHYQLEGLI
ESPSVDADGDCFSPMLLNATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQS
GAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAI
WKANRPLNSGEGWEAMRRELSVLYSRFYGILLGGLLFMYEFHKFLRPILLLLHSFWIPQI
VTNVIRDSRKPLHPHYILGMTLTRLAIPLYVFGCPHNFMRIEPDKNWCICLGVFIVLQAS
ILLLQHYLGSRWFIPRQILPEKYNYYRRFDQGANHATDCVICMTAIDHTQRSNNCMVTPC
DHFFHSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggcaaaaagattgtattttttgaggttgaagaggagaaattatggagttctg
tttagaattctttttagtttatggttcatccttggaaggattttcccagtaatgggtgtc
aggcctctcagagaaagatatcgttcgtggggagatgagtggcttctggtaagaaaggat
gagaatgaattggggcctttttctgcttggaatataacaggaacttacagagggtcttgg
aggttcctagattcaacaaatagctcttccaagtttcctgattttaggaagtccaatggc
aactcggtccttgaattgataagtaatccaacaaaaataactggtgtacattatgttcag
ggtgcaataattttccatgatgtttttgacaatgaacatggagttggtggtgcccaaata
agggtagaaggtgtatatatatggccatttagacaacttcgaatggtagcttacagtggc
aaagatggtgagtttggccaggaagacgattatctattatcaaatccatatcacttgctt
ggagttttctcgtcccagatattccaggagtcttctcgagataagatttggaaaaagaaa
cactcaccgttttacgagatggagaaaaattgtaatattgaaattgctgcacaaattgct
cgtgtctcatcatcctcaaatgatggagctcgtgatcattatcaactagaaggattgata
gagagcccttcagtggatgctgacggagactgtttctcaccgatgcttttgaatgctact
tctgtcaatatagaggtttactacaacaaagcggtgaactacacattgatggtcacattt
atatcttttctgcaagtgctccttctgattcgacaaatggaacatagcaacacccaatca
ggagctgccaaagtttcaattctgatgattggacaacaggctatcatggatgcttatctt
tgtcttttgcatctgaccgcagggatacttgttgaatcccttttcaatgcttttgcaact
gctgcattcttcaagtttgttgtcttctcgatatttgagatgagatatctacttgctata
tggaaggcaaataggcccttgaatagcggagagggttgggaagcaatgaggcgcgaattg
tcagtactttacagccgtttctatgggatccttttaggcggcctattgttcatgtatgag
tttcacaagtttctgcgccctattcttttacttttacactcattctggatacctcaaatt
gtaactaatgtcattcgcgactcaagaaaaccgttgcaccctcattacatcttgggaatg
actctaactcgtttggcaattccattatatgtatttggctgtcctcacaatttcatgcgt
atagagcctgataaaaattggtgcatctgcttgggagtttttattgtgctgcaggcatca
attcttctgttgcagcattaccttggatctcggtggttcattccacgtcagattttaccc
gagaagtataactattatagaaggtttgatcagggtgcaaatcacgccactgactgtgtt
atttgcatgactgctattgatcatactcaacgctcaaataattgcatggtgacaccttgt
gatcatttctttcactccggttgtttgcaaagatggatggacataaagatggagtgtcca
acatgccgacgtcctcttccaccagcttga
DBGET
integrated database retrieval system
