Solanum tuberosum (potato): 102581953
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Entry
102581953 CDS
T02981
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Module
sot_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102581953
Enzymes [BR:
sot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102581953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
PolC_DP2_N
Motif
Other DBs
NCBI-GeneID:
102581953
NCBI-ProteinID:
XP_015163331
LinkDB
All DBs
Position
Un
AA seq
432 aa
AA seq
DB search
MLFRILFIVLLATSLFSTSCNGKKKIGKPIKHGHNAPKNGHVKKRTQAIIDIQSFGAKGD
GLSDDTEAFIKAWKKTCKTENGVLLIPRHKIYYIGPIKFHGPCKKGLRMMINGELRASKD
ISDYKEDKRHWLLFQNMENFIVEGIGSIDGNGQVWWKSSCKVDKTIPCNTQTLTVPTAMS
FYNCTNLKVRNLEFKNPQKMHLTITKSELVEVSRLKITAPADSPNTDGIHVSGTKDIDIH
HSYIETGDDCISIVNGSTNVRARYIHCGPGHGISIGSLGKNKEEDVVSNIYVHDATLRGT
TNGLRIKSWQGGRGYAKDILFQNIQMVNVTNPIIIDQFYCDQDKPCKEQKEAVHVSNIMF
KNIKGTSSTQTAIKLKCSKTVPCKGIQMENVNIRHEGGLTVKALCTNVKYTTKGVLFPKC
PSEPHPLAFLWN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctttttagaattctctttatagtattgttagccacttcattgttttcaacttcttgt
aatggaaaaaagaagattggaaaaccaataaaacatggtcataatgcaccaaaaaatggt
catgtgaaaaagaggacacaagcaattattgatatacaatcttttggagccaaaggtgat
ggactttcagatgatacagaggcatttataaaggcttggaagaagacatgcaaaacagaa
aatggtgtgcttttgattccaaggcacaaaatatattacattggaccaattaagtttcat
ggtccttgtaagaaaggacttagaatgatgataaatggagaactaagagcttcaaaagat
atatcagattataaggaagataaaagacattggcttttattccaaaatatggaaaatttt
atagttgaaggtattggaagtattgatggcaatggacaagtatggtggaaaagctcttgt
aaagttgataaaactattccatgcaatacacaaacactaacagttccaactgctatgtcc
ttttataattgtacaaatttgaaagtgagaaatttagagtttaagaatccacaaaaaatg
cacttaacaattacaaaaagtgaacttgttgaagtttcaagattgaaaattaccgctcct
gctgatagccccaacaccgatggaattcatgtttctgggacaaaagatattgatattcac
cattcttatattgaaacaggtgatgattgtatctcaatagtaaatggttccactaatgtt
agagcaagatatatacattgtggacctggccatggaataagtattgggagcttgggtaaa
aataaagaggaggatgttgtttcaaatatttatgtacatgatgctaccttgaggggaaca
accaatggattaagaataaagtcttggcagggaggacgtggatatgcaaaagacattctt
tttcaaaacatacagatggtgaatgtgaccaaccccataatcattgatcaattttattgt
gaccaagataagccatgcaaagagcagaaagaagcagtgcatgtgagtaatataatgttc
aaaaatataaagggaacgagttccacgcaaactgcaattaaattaaaatgcagtaaaact
gttccatgcaaagggatacaaatggaaaatgtgaatatacgtcacgaaggaggtttaact
gtcaaagctttatgtacaaacgttaaatacacaacaaagggggtgttattcccaaaatgc
ccttccgagccgcacccattggcatttttgtggaattaa
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