Solanum tuberosum (potato): 102582063
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Entry
102582063 CDS
T02981
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102582063
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102582063
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
Pre-60S particles
Helicases
102582063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
102582063
NCBI-ProteinID:
XP_006347097
UniProt:
M1C1D0
LinkDB
All DBs
Position
Un
AA seq
594 aa
AA seq
DB search
MASTNQNKALTNTRFSDLEPRLAEPVLEALTNSGFEFCTPVQAATIPLLCSYKDVTVDAA
TGSGKTLAFVLPVVEIIRRSSSNPKPHKVMGIIISPTRELSSQIFHVAQPFISTLANVRP
MLLVGGLEVKADIKKIEEEGANLLIGTPGRLYDIMERMDILDFRDLEILILDEADRLLGM
GFEKQLNSIICRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLSGSASGN
STSSKTPSGLHIEYLECEADKKSSQLVHLITKNKSKKIIVYFMTCACVDYWGTILPRLSC
LKSFSLISLHGRMKQSAREKALASFTALSTGVLLCTDVAARGLDIAGVDYIIQYDLPQDD
KMFIHRVGRTARLGRQGSAVVFLLPKEEAYVEFLRIKDVFLEEGECASDAPDIIDEIRSA
AKKDRDVMEKGLRAFVSYIRAYKEHHCSYILRWKELEIGKLGMGYGLLQLPSVPDVKHHS
LSTKGFTAVEDINLDEIKFKDKSREKQRKKNLQVKKAAMAQQQEQKTQRLKKEANSTATA
SRKRTAKQRRATQLVEDEDEITREYRLLKKLKKGAIDENEFAKLTGTEDLLSDI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgaatcagaacaaagctttaacgaatactcgtttctccgacctcgaaccg
cggcttgctgagccagttttggaagccctaaccaactccggcttcgagttctgtactcct
gttcaggccgccaccatacccttactctgcagctacaaggatgtcaccgtcgacgccgcc
actggctctggtaaaaccctagccttcgttttacctgtggttgagatcatccgtcgctcc
tcttccaatcctaagcctcacaaggtaatgggtataattatatcacccaccagggagttg
tcgtcgcaaatatttcatgttgctcagccattcatttccacattagcaaatgttaggcct
atgcttcttgttggaggattagaagtaaaggcagatatcaaaaagatagaggaggaagga
gcaaatttgttgattgggacacctgggaggctatatgacataatggagcgcatggatata
ctggactttcgggatcttgagatcctgatattagatgaggctgataggctattaggcatg
ggattcgagaagcagctaaattcaatcatttgtcgtttacctaagcttcgtagaacgggt
ctcttctctgctactcaaactgaagcagttgaagaactatcaaaggcaggattgagaaat
cctgtcagggttgaagttcgggcagaagcaaaacagttgagcggttctgcgtctgggaat
tcgacctcgtcaaaaacaccttctggccttcatattgagtatctggaatgtgaagcggac
aagaaatcatcgcagcttgtacacctcataacaaagaacaagtcaaaaaaaattatagtt
tatttcatgacttgtgcttgtgttgattattggggaactattcttccacgtctctcttgt
ctgaaaagtttttcattaatctctcttcatggaaggatgaagcagagtgcaagggagaaa
gcactagcatcatttacagctctttccactggtgttcttttatgcacagatgtagcagca
cgtggacttgatattgcaggtgttgattatataatacagtatgaccttcctcaggatgat
aaaatgtttatacatagagtaggccgaacagctaggctgggccgacaaggtagtgctgtt
gtttttctattaccaaaggaggaagcatatgtggagttcttgcgtataaaagacgttttc
ttagaagagggggaatgtgcctctgatgctcctgatattatagatgaaatacggtcagca
gcaaagaaagatcgtgatgtaatggagaaaggactcagagcctttgtatcatacatccgt
gcatataaagagcaccactgctcttacattttaaggtggaaggagcttgagattgggaag
ctgggcatgggatatggtcttttgcaacttccttctgtgcctgatgtgaagcatcattct
ctttctacaaagggattcactgctgttgaagatatcaacctggacgagatcaagtttaag
gacaagtccagggagaagcaaagaaagaagaatttacaagtgaaaaaagctgcaatggca
caacaacaagaacagaagacacagagacttaaaaaagaagcaaattctacagcaactgcc
tcgagaaagagaactgccaaacaaagacgtgctacacagttagttgaagatgaagatgag
atcacaagggagtaccgcttattgaaaaagctaaaaaagggtgctatcgatgagaatgag
tttgcaaaattgactgggacagaagacttgctttctgacatatga
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