Solanum tuberosum (potato): 102582186
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Entry
102582186 CDS
T02981
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
102582186
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
102582186
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
DUF5647
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
102582186
NCBI-ProteinID:
XP_015163988
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All DBs
Position
Un
AA seq
685 aa
AA seq
DB search
MKKVWWKRKWSYFLGLLGIFLQLFLLINECAATRRIVEKNIPLDLQTYPPVQLLRLNKHV
LVDNGVFNITFSVPDGMVINIQYNGIDNLLENKNKENNRGYWDIVWNKAEKQGDIFDKLE
GTKFEVILQDENQVELSFTRIWKTLNSSSLSMNIDKRFIIHRGSSGFYSYAIFERLEGWP
DIDVYQGRMVFKLNEKLFSYMAISDERQRIMPTAQDREMGRQLDYKEAVLLTGPSTSFLK
GEVDDKYQYSVENKDNRVHGWISPTLKTGFWMITPSSEFQTGGPVKQDLTSHTGPITLSM
FFSTHYAGEIIGLRFRNGEPWKKVFGPVFIYLNSVSSDDEGILTLWTDAKEQMLIETENW
PYEFPLSQDFVGADQRGIVSGRLLVNDSYMSKTLITPNSTFIGLAAPGDVGSWQIENKGY
QFWTQTDNEGYFLINNIIPGNYSLYAWVPGFIGDYKYMAYINITPGSRTRLQTLVYYPPR
NGPTLWEIGIPDRTAAEFFIPNPQPKLQDQLYIAHYEEKFRQYGLWDRYTEIYPNDDLVY
TIGSSNYQTDWYFAHVNRYIYKDDGDKTYIPTTWQIVFDLQEVKDFSNFTLQLALASTNE
AELQIRINDQNPEHAPHFTTGSIGKDNAIARHGIHGLYRMYSIDVPSDLLAIGSNTMFLK
QNRGSSSWSGLMYDYIRLEGPSTND
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtttggtggaaaagaaaatggagttattttcttggattgttgggaattttt
cttcagttatttttgctaattaatgaatgtgcagcaacaaggagaattgttgagaagaat
atcccattggatttgcaaacctatcctccagtgcaattacttagactaaataaacacgtg
ttggtggataatggcgtattcaacatcacattttctgttcctgatggaatggttattaat
atacaatacaatggcattgataatttgttggaaaataaaaataaagaaaataatagaggg
tattgggatattgtttggaataaagcagaaaaacaaggggacatttttgacaaacttgaa
gggacaaagtttgaagttatattgcaagatgaaaatcaagtagagctttcattcacaagg
atttggaagacattaaattcctcaagtctttctatgaatattgacaaaaggtttataatt
catagggggagtagtggcttttattcctatgcaatttttgagcgtttggaaggatggcca
gatatagatgtctatcaaggaagaatggtcttcaagcttaatgaaaagctgttctcttat
atggctatttcagatgaaaggcagaggataatgcccacggcccaagatcgagaaatgggc
cgacagcttgactacaaagaagctgtacttcttacaggcccatctacttctttcctcaaa
ggagaggtggatgataaataccaatactctgttgaaaacaaggataatagggtccatggg
tggataagcccaaccctaaaaaccggattttggatgattacaccaagtagtgagttccaa
acaggtgggcctgtcaaacaagaccttacttctcacaccggcccaataacattatcgatg
ttcttcagtacacattatgccggggagattatagggctcagatttcgaaatggagagcca
tggaagaaagtttttggacctgtttttatttacttaaactctgtttcatcagatgatgaa
ggcattctaacactatggacagatgcaaaagaacagatgttaattgaaaccgaaaattgg
ccgtatgagttccctctttcacaagatttcgttggagctgatcaacggggtattgtaagt
ggcagattactcgttaacgatagctacatgagtaaaacacttatcactccaaattcaact
ttcattgggttggctgcacctggagatgttggatcatggcaaattgaaaataagggttat
cagttttggactcaaaccgataatgagggatatttcttgattaacaatatcatccctgga
aattatagcttgtacgcttgggtccctggatttattggtgattacaaatacatggcctac
atcaacataaccccaggatcaagaactaggttacaaactcttgtgtattaccctccaaga
aatggtccaacattgtgggaaataggcattccagatagaactgctgcagaattcttcatt
cctaatccacaaccaaaactccaagaccaattatacattgcacattatgaagaaaagttt
aggcaatatggattatgggatcgttatacagaaatatatcctaatgatgatttagtctac
actattggatcaagcaactatcaaacagattggtactttgctcatgtgaatagatatatt
tacaaggatgatggggacaaaacatatataccaactacatggcaaattgtgtttgatctt
caagaagtaaaggatttctcaaattttactcttcaactagcattagcatcaacaaatgaa
gctgaattacaaatccgaataaacgatcaaaatccagagcatgcacctcattttacgaca
gggtcgataggcaaggataacgcaattgcaagacatggaattcatggattatatagaatg
tatagtatagatgtacctagtgatcttctagctattggaagtaatactatgtttcttaag
caaaatagaggttcgagctcttggagtggactcatgtatgattatattcgtctcgaagga
ccctccacaaatgattaa
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