KEGG   Solanum tuberosum (potato): 102582340
Entry
102582340         CDS       T02981                                 
Name
(RefSeq) RING-H2 finger protein ATL43
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102582340
Enzymes [BR:sot01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102582340
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102582340
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 Rtf2 zf-RING_UBOX Prok-RING_1 SLX1_C zf-RING_16 FAM209 Adeno_E3_CR2 Prok-RING_4 zf-RING-like zf_RING_Vps8_fungal zf-RING_4
Other DBs
NCBI-GeneID: 102582340
NCBI-ProteinID: XP_006359505
UniProt: M1D102
LinkDB
Position
Un
AA seq 422 aa
MGICNVHFLSPSLWLFFFVMITVIMNLSYAEENAQSPPPALPPYYRSRGSPFRPSIAIVV
AILTTIFSIVFMLLLYAKHCKREGTFGTTSGGLTNLHSSSFRKNSGIDRTVIESLPVFRF
GSLRGQKAEGLECAVCLNKFESSEILRLLPKCKHAFHIECVDTWLDAHSTCPLCRYQVDP
EDILLISHENERKSASSSICSSSPVKEKEKEKEKQRIYSSSSGRHSSAGERGTSSSSLQI
IVESPKQETPSFLNKRMSLDSWNFYRKKSKSTKLSRKDGMLLNKKKAPEAEVEAVEERRL
EHRIIISGDEPELGTGSGSRHRWSDVEGCDRLYLRSEMILSESRRYSGSRKRTAEMGSGR
RVINERSVSELTGMSRFRSNNEEERERKGAVKRWLDWISQSQNKSVSLSDSGAGAAASSS
AT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgggcatttgtaatgttcattttctttcgccttctctctggctcttcttcttcgtgatg
attactgtaattatgaatttgagctacgcagaagaaaatgctcaatcgcctccaccagct
ttaccaccgtattacagatctagaggttcgccttttaggccgagcatagcaatagtagta
gcaatactcacaacgattttctcaatcgtatttatgttgctattatacgcaaaacactgt
aagagggaaggtacatttggtaccacgtccggaggattgacgaacctgcattcgtcaagc
ttccggaaaaactctggtattgatcggacggtgattgagtctttgcctgtatttcgattt
ggatctcttagaggtcaaaaagcggaaggacttgaatgtgcggtttgtttgaataaattt
gaatcgagtgaaattcttcgattgttacctaaatgtaaacacgcatttcatattgagtgt
gttgatacttggcttgatgctcattctacttgtcctctttgtcgatatcaagttgaccca
gaagatattcttctaatttcacatgaaaatgagagaaaatctgcttcttcttccatatgt
tcatcctctccggtgaaggaaaaagaaaaagaaaaagaaaaacagaggatttattcttca
tcttctggaagacattcttccgccggagaaagaggaacttcatcatcgtctttgcagata
atcgttgaaagtccgaaacaggaaacgccgtcgtttctgaacaagagaatgtcgttagac
agttggaatttctaccggaaaaaaagcaaatccactaaattatcgagaaaagacggaatg
ctattaaacaaaaaaaaggcgccggaagcggaggtggaggctgtggaggaaaggcggttg
gaacaccgaataattatatccggcgatgaaccggagctgggcacgggaagtgggtcccgg
caccggtggagtgacgtggagggttgtgataggttgtatttgaggtcggagatgatatta
agcgagagccgtagatattcagggtcgagaaaacggacggcggagatggggagtggcaga
agggtaataaatgagagaagtgtgtcggaattgacagggatgagtaggtttaggagtaat
aatgaagaagaaagagaaaggaaaggagctgtaaaaaggtggttggattggatttctcaa
tcacaaaataaatctgtttctctgtctgattctggtgctggtgcagcagcttcttcttct
gcaacttga

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