Solanum tuberosum (potato): 102582521
Help
Entry
102582521 CDS
T02981
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102582521
Membrane trafficking [BR:
sot04131
]
Protein recycling
Others
EARP complex
102582521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
102582521
NCBI-ProteinID:
XP_006349052
LinkDB
All DBs
Position
Un
AA seq
1092 aa
AA seq
DB search
MQSNSSPPFPLIPLVLFNGGQLSEGGFELSRFLFLGSLLFSQGGDDGMDLSKVGEKILSS
VRSARSLGLLPSSSDRPEVPERAAAAAALARVLAGLPPHQRYTLSSSSEELSSIYGSKPP
GQVVEELEEEFYEEEFDPVGHILEHMPSEESELAYLEDQATLRLSQLDRISERLSRHVME
HHEVMVKGMDLVRQLERDLKIANVICMNGRRYLTSSRNEVSRDLIVSNNSKRKQALLDVL
PVLTELRHALNMQSTLETLVEEGRFSKAFQVLSEYLQLLDTLSELSAAQEMSRGVEVWLG
KTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQEVLSETHSALKT
TVQEDLDNNNVHSSRLTYSDLCTQIPESKFRQCLLATLAVLFRLMCSYHAIQSFQPEDKE
DISSPSTERAPTLASVEDPPTTSVASSDTAMHGSSNINYRVEEARDDGSTASSSGSPWFQ
LRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIHSASIHQFLITYEDLNIFVLAGE
AFCGSEAVEFRQKVKSVCESYLAAFHRQNIHALKMVLEREHWLILPPETIEVVSFAGLVG
DGAALIVSSETSPNTRLLQVRKPVHPIQTKSSKRNGFSSWLKGGNPFLPKLNGSSREYLE
SCLPNGSAMQESGNSNEDSLDKSSLRNSDVIHVNGNTNLSEDENEDLHADFIDEDSQLPS
RISKPGHSRSRSSHWSNEQIKEQTGSSLSLLRSLDKYARLMQKLEIVNVEFFKGFCQLFG
IFFHFVFETFGQQSIHPSGKAVTDTLSHRLKTALLRITHDCDQWMKPQSQSFSSSSPSSS
STSFSHMDVTPTSPRSYLTGASLGLKERCAGADTIYVVARLLHRSKAHLQSMLQNNAALV
EDFYVHLVDAVPDLVDHIHRTTARLLLHINGYVDRIANAKWEVKELGVEHNGYVDLLLGE
FKHYKTRLAHGGIQKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMSLDLQVLIN
GLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWSRAHPEYSKSQIVGLINLVSTMKGWK
RKTRLEILEKIE
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaattcttctccgccttttcctttgattccacttgttctattcaatggcggt
caattgagcgaaggtgggtttgaattatctaggtttttgtttttgggttctttgctcttc
tctcaaggaggcgacgacggtatggacttgtctaaagttggagagaagattttgagttcc
gttcgttctgctagatctcttggtcttctcccttcttcttctgatcgtcccgaggttcct
gaacgagctgcagctgctgctgcacttgcacgtgttctagctggactacctcctcatcag
agatacactctttcatcaagctcggaagaactgagctcaatatatgggagcaaacctcct
ggtcaagttgtcgaggagctggaggaagaattctatgaagaggaatttgatcctgtcgga
catattctggagcatatgccatctgaagagagtgaattagcttacttggaagatcaggcc
actcttagattatcacagctggacagaatttctgaacgcttgtctcgccatgtcatggag
catcatgaagtaatggtgaagggaatggatcttgtgagacaactagaaagagacttgaag
attgcgaatgtcatttgcatgaatggtcgccggtatttaacctcttcaagaaatgaggtt
tcaagggatctcattgtctccaacaattctaaaagaaaacaagcactcttggatgttctc
cctgtcctgactgagctgcgccatgcactaaacatgcaatcaacacttgaaactcttgtt
gaggaaggaagattctcaaaggcattccaagtactatcagaatatttacaacttttggac
acactttcagagctttctgccgcacaagagatgagccgtggtgttgaggtttggttaggg
aaaactcttcaaaagctggattcacttctattaggagtgtgccaggatttcaaagaggag
aactatgtaactgtagttgacgcttatgcactaattggagatgtcgctggccttgctgag
aagatacaaagtttctttatgcaggaggttctatctgaaacccactcagcgctgaagact
actgtacaagaggatctggataacaacaatgtgcacagttctaggctcacgtatagtgat
ctgtgcactcagatacctgaatccaagttcaggcaatgcttgctagcaacattagctgta
ctttttaggttgatgtgttcatatcatgcaatacagagcttccagcccgaggataaggaa
gatatttcgtcaccaagcacagagagagcaccaactttagcctctgttgaagacccacca
actacttctgttgcttcatctgacactgccatgcatggttcatccaacataaattatagg
gttgaagaggcaagggatgatggaagtacagcatcaagcagcggatccccctggtttcag
ctgaggaaagatgctacgacctttgtttcacatacattacttagaggtcgaaagaatctt
tggcaacttacaacaagtcgtgcagctgtcttgctttcttcaccggctattcattcagct
agcatccatcaattcttaataacttatgaagatttaaacatttttgtactggctggggaa
gccttttgtggaagtgaagcagttgagttcaggcagaaagtgaaatctgtttgtgaaagt
tatttagctgctttccatcggcaaaatatacatgctctcaagatggtgctggaaagggag
cattggctgatattgccgccagagacaatcgaagtagtaagcttcgctgggcttgtcggt
gatggagcagctttgatagtttcatctgagacctctccgaatactcgattgctgcaagta
cgcaagcctgtacatcctatccaaactaaatcctctaagaggaatggattttcaagttgg
cttaagggtggaaatccatttctgccaaaactaaatggtagttcgagggaatacttggag
tcttgtttgcctaatggatctgcaatgcaagaaagtggaaactccaatgaagattctttg
gataagagttctttgagaaacagtgatgtaattcatgtcaatgggaatactaatttatca
gaagatgaaaatgaagatcttcatgctgattttattgatgaagatagccaactacctagc
cggatttctaaacctggtcattcaagaagtcgttcttcacattggagcaatgaacaaata
aaagagcaaacaggatcatcacttagcctcctgaggtcattggataaatatgcaaggttg
atgcagaagttagagattgttaatgttgagttttttaagggattttgccaattgtttggg
atcttctttcacttcgtctttgagaccttcggtcagcaaagtattcatccaagtggaaag
gctgtgactgacacgctgtcgcatagactgaagactgcattattacgaataacacacgat
tgtgaccaatggatgaaaccccagtctcaatcattttcttcctcttctccctcaagctca
agtacatcattttctcacatggatgtcactcctacgagcccacgtagttacttaactggt
gcatccctgggactgaaggaaagatgtgcgggtgctgacactatatatgttgttgctcgg
ttattacatagatctaaagcgcatcttcagtcaatgcttcagaataatgcagcactggtt
gaggatttctatgtgcatttggtggatgctgtaccggaccttgttgatcatattcataga
acaactgctagattacttctccacataaatgggtatgttgatcggattgccaatgctaaa
tgggaagtgaaagagcttggagtagagcacaatggatatgtagatcttttgcttggagaa
tttaagcattataaaacaaggcttgctcatggaggaattcagaaggaggtccaagacctc
ctcttagaatacggagtagataatgttgctgaaattctcgttgaaggcctatctcgggtg
aagaggtgtactgatgaaggacgagctcttatgtcattagatcttcaggtattgataaat
ggcttgaagcatttcatttctgtagacgtgagacctaaactacagatagttgaaacattc
atcaaggcctactatcttccagaaaccgaatttgtgcactggtcacgtgctcatccggaa
tacagtaaaagtcagattgttggtctaatcaacctagtctctacaatgaaaggttggaag
aggaaaaccaggttggaaatattggaaaagatcgaatga
DBGET
integrated database retrieval system
