Solanum tuberosum (potato): 102582647
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Entry
102582647 CDS
T02981
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00100
Steroid biosynthesis
sot00909
Sesquiterpenoid and triterpenoid biosynthesis
sot01100
Metabolic pathways
sot01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102582647
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
102582647
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sot01006
]
102582647
Enzymes [BR:
sot01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102582647
Prenyltransferases [BR:
sot01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102582647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
102582647
NCBI-ProteinID:
XP_006351216
LinkDB
All DBs
Position
Un
AA seq
412 aa
AA seq
DB search
MELMQEILMHPDELYPLVKLMLTAKRVEKKTSVWLLQPHWAFCYATLRKVSRSFALVIQQ
LPSDLRNVVCVYYLVLRALDTVEDDTSLAIEVRVPILRNFYCNFYDPQWHFSCGTKAFKV
LMDQFHHVSTAFLELDTNYQEVIKDITKRMGEGMAKFLCKEVETIDDYNEYSFYASGLCG
LGLSKFFYVSGREDLAPESISISMGLFLQKISIIRDYLEDINEVPKCRMFWPRQIWSKYV
NKLEDFKYEENSVKAVQCLNEMVTNALLYVEDCLTSMSSLRDPAIFQFCAIPQIINMGNL
SMYYNNVEIFKGVVEMRRGLCAKIIDQTRTMADVYRAFYDFCCIMESKVDRDDPNATSTL
KRLEAILKTCRDSGTLNQRKSYTFSHQPNYNIPVLIIFFFIMMAILLSTKIP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagttgatgcaggagattttgatgcatccagatgaattatacccattggtaaagctc
atgttaacggcaaaacgcgtcgagaagaagacgtcagtgtggctgttgcagccacactgg
gccttctgctacgctactctccgaaaggtgtctcgtagctttgctcttgtaattcaacaa
cttcctagtgaccttcgtaatgtagtttgtgtttattatttggttcttagagcacttgac
actgttgaggatgataccagcttagccattgaggttagagtacctattttgagaaatttt
tattgcaacttctatgatcctcaatggcatttttcatgtggtacaaaggcattcaaggtt
cttatggaccaattccatcatgtttccactgctttcctagagcttgatacaaattatcaa
gaggtgattaaggatattaccaagagaatgggtgaaggaatggcgaaatttctatgcaag
gaggtagaaacaatcgatgattataatgaatatagtttctatgcatctggactttgtgga
ttaggattatcaaagtttttttatgtttctggaagagaagatttagcaccagaatccatt
tcgatttccatgggtttatttcttcagaaaataagcatcattagagattatctagaggac
ataaatgaagtacctaaatgtcgtatgttttggcctcgtcaaatttggagtaaatatgtt
aacaaactcgaggactttaagtacgaggaaaactcggtcaaggcagtacaatgtctgaat
gaaatggtcactaatgctttattatatgtagaagattgtctgactagcatgtctagttta
cgcgatcctgctatctttcagttctgtgcaattccacagatcataaatatggggaatttg
tcgatgtactacaacaacgttgagattttcaaaggcgttgttgaaatgagacgaggcctc
tgtgctaagattattgatcagacgaggacgatggctgatgtctacagagctttttatgac
ttctgttgtataatggaatctaaggttgatcgcgatgatccaaatgcaacgagtacattg
aagaggcttgaagcaattttgaaaacttgcagagactccggaaccttaaatcaaaggaaa
tcttacacattcagccatcagcctaattataatattccagttttgattatcttctttttc
atcatgatggctattcttttatcaacaaaaataccttaa
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