Solanum tuberosum (potato): 102582659
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Entry
102582659 CDS
T02981
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
sot03015
mRNA surveillance pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102582659
09122 Translation
03013 Nucleocytoplasmic transport
102582659
03015 mRNA surveillance pathway
102582659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102582659
03041 Spliceosome [BR:
sot03041
]
102582659
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102582659
Spliceosome [BR:
sot03041
]
Complex C
Other components
EJC/TREX
102582659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
102582659
NCBI-ProteinID:
XP_006354028
UniProt:
M1CMR4
LinkDB
All DBs
Position
Un
AA seq
874 aa
AA seq
DB search
MSDYPVLDNRPINKWKVAELREELKRRNLTTKGLKDDLVRRLNEAICIEMEAAAVKQSKD
DDRDIDPASGLEYTEPDPDPVKLVDDVLEHPQIEVTNGSDHITDATCGLEDAQPNSNPDI
LVDNVQKQYQDEFNSIGSDVARASTKICLVGIDQNKVLDEVATGDNDDVLKHHQNEVNEI
DGDVASASTKNSVVEIDQNKVLDEVATGDTTAGESEHLGAPVGSTSIINEIASTDQFGED
KLDKEHKVIDSSQDNYVVDGVSEVRDGSIPVGSTREDVEDMKISSYEGVLEDNLRRQEND
VEVTPVTSKEALKNHSIKLDNEGLKLSDMDAEPDMSNPATQVYEVNPNLGSQVKSDSFST
DTLPINENKDLNDNLNADNVKLETEVVRQEMELQSSSKDLSGVGSSHPLDGQMPHEMQGL
VGETDDDKSSDVKFSMKNDNADQVSVDVSKVEHDFESKTPNNSEQQPDIQFENARTLGDV
EEPSLSPMKIEASAEDTHGLAASGDDRKDFSKIADVVDGENMEKINLDQSSADDSMEEDV
VETKHVDFDHISKKENDKTEEFITGMTEEPKVRPSGSSDAMQLDIPSEKVASPQETKDKS
LALSEKRKFQDEAGGGSKEPAKRQRRWNTEKTAEPQNSSIALTKKVVQPTPIKPILGRTN
STVGGDSPKERFVPKSSKTATTSLKIENFLRPFTLKAVQELLARTGEVCCFWMDQIKTHC
YVTYSSVEEATETRNAVYNLQWPPNGGRLLVADFVDPQQVQTKIEGREPASPPKVTSPAV
PASSSVQTPPAQQQGRKQQAELEHSLTRQPPPAPPSAPPTKEMLPSPVADKNDPPIVTLD
DLFRKTKATPRIYYLPLTDEEVAKKLAIRGNAKP
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactaccctgtgcttgataatcgtccaattaataaatggaaagtagcagaatta
agggaagagcttaagaggaggaacttaacgacaaaaggtttgaaggatgatctggttagg
cgattaaatgaagctatctgcatagaaatggaagctgctgcagttaaacagagtaaggat
gatgatcgtgacattgatcctgccagtggtcttgaatatactgaacccgaccccgatcct
gttaaattggttgatgatgttctggagcatccccaaattgaagttactaatggttctgat
catattactgatgctacatgtggtcttgaagatgctcaaccaaatagtaatcctgatata
ttggttgataacgttcagaagcaataccaagatgaatttaacagtattggcagtgatgtt
gctagggccagcaccaagatttgtcttgttggaatagaccagaacaaagtcttggatgag
gttgcaactggagataatgatgatgttctgaagcatcaccaaaatgaagttaacgaaatt
gatggtgatgttgccagtgccagcaccaagaattctgttgttgaaatagaccagaataaa
gtcttggatgaggttgcaactggagataccactgctggagaatcagaacatttgggggca
ccagttggtagcactagtattataaatgagattgcatctactgatcaatttggtgaagac
aaacttgataaggaacacaaggttattgattcttctcaggataattatgttgttgatggg
gtatctgaagtccgggatggttctattccagtcggtagtactagagaggatgttgaggat
atgaaaatttcatcttatgagggagtgcttgaggacaaccttaggagacaagaaaatgat
gtggaggtaaccccagtaacatcaaaggaagccttgaaaaaccacagcattaagttggat
aatgagggtctgaaactctcagacatggatgctgagccagatatgtccaatccagccact
caggtatatgaggtcaaccctaatttagggtctcaagtaaaatctgactcattttctact
gatactttgcccattaatgaaaataaagatttaaatgataatttgaatgctgataatgtc
aaattagaaactgaagttgttaggcaggagatggagctgcagtcatccagcaaagaccta
tcaggtgttggtagctctcatccattggatggtcagatgccacatgagatgcagggtctt
gttggagaaactgatgatgacaaatcttcagatgtgaaatttagcatgaaaaatgacaat
gcagatcaggtttctgttgacgtttccaaggtagagcatgatttcgagagtaagactcca
aataatagtgagcaacaacccgatatacagtttgaaaatgctagaactttaggtgatgtt
gaagagcctagtttgtcacccatgaaaattgaggcatctgcggaagatacacatggtctt
gctgcttctggtgatgatagaaaagattttagcaagatagccgatgtagtggatggtgag
aatatggaaaagataaacttggatcagtcttcagctgatgattccatggaggaggatgta
gtagagacaaagcatgtggattttgatcatatttctaagaaggagaatgacaagactgaa
gagtttattacgggaatgacagaagagcccaaagttcgaccaagtggttcttctgatgca
atgcagctagacattccttctgagaaggttgcgtctcctcaagaaactaaagataagtct
cttgctttgtcagagaagagaaagtttcaagatgaagcaggaggtgggagtaaagagcct
gcaaagaggcagcgtagatggaacactgagaagactgctgaaccccaaaattctagtatt
gctttaacaaagaaggttgttcagcccacccctatcaaacccatccttggcaggactaac
tctacagttggtggggattcacccaaggagcgctttgtaccaaagtcttcaaaaacagcc
actacttctctcaaaattgagaatttcttgcggccttttacactgaaagctgtgcaagag
ctccttgcaaggactggtgaagtgtgctgtttctggatggaccagataaagacccattgc
tatgtcacgtattcttcggtagaagaagccacagagaccagaaacgcggtgtacaatctc
caatggccaccaaatggaggtcgtctcctggttgcagattttgttgatcctcaacaggtg
caaaccaagatagagggtcgggaacctgcttctccaccgaaagttaccagtcctgctgtg
cctgcttcatcctctgttcaaacaccacctgctcagcagcagggtcgcaaacagcaagct
gagttggaacattcactcacacgccagccaccacctgctcctcctagtgctcctccaaca
aaagagatgctgccttcacctgttgctgataaaaatgatccccctattgttactttggat
gacctcttcagaaagaccaaagccactccccgtatctattatttaccgctgacagatgaa
gaagttgctaaaaagcttgccattaggggaaatgctaagccttga
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