Solanum tuberosum (potato): 102583033
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Entry
102583033 CDS
T02981
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102583033
Spliceosome [BR:
sot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102583033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
NTR2
DUF4604
TMCO5
Motif
Other DBs
NCBI-GeneID:
102583033
NCBI-ProteinID:
XP_006362530
UniProt:
M0ZJR0
LinkDB
All DBs
Position
Un
AA seq
939 aa
AA seq
DB search
MSGKSRNFRRRGGDDGDDDETSAKTTNGTAAKPTTTASATKPKKKSLLSFADDEDSDDTP
FVRPSSKPSSASSRITKPSSSSSAHKLTSGKDRITPKPPSFTSNVQPQAGTYTKEALLEL
QKNTRTLVGSRSAQPKPEPRPGPVEPVIVLKGLVKPPFSVTAQTQQNGQESEDDEMDVDQ
FGGTVNRLGSMALEKDSRKKDDVGSVIPDKMTIDAIRAKRERLRQARPAAQDFIALDEGG
NHGEAEGLSDEEPEFQQRIGFYGEKIGSGRRGVFEDFEDKAMQKDGGFRSDDDEEDEEEK
MWEEEQVRKGLGKRLDDGSNRGVMSSVVSSAAAVQNVQKANFGSSAVGASVYSSVQSIDV
SDGPTIGGGVVGGLPSLDALSISKKAEVAKKALYESMGRLKESHGRTVTSLHKTEENLSA
SLSKVTTLENSLSAAGEKYMFMQKLRDFVSVICALLQDKGPYIEELEDQMQKLHEERAAA
ILERRAADNDDEMKELEAAVSAARQVLSRGGSNAATIEAATAAAQTSTAAMRKGGDLPIE
LDEFGRDKNLQKRMDTTRRAEARKRRRVKNDVKRMSAIKCDSSYQKIEGESSTDESDSES
TAYQSNRDQLLQVSEQIFGDAHEEYSQLSVVVEKFDRWKKDYASSYRDAYMSLSIPVIFS
PYVRLELLKWDPLHENTDFMDMNWHNSLFSYGIPPEGEAEISVDDTDVNLIPQLVEKLAI
PILHNQLANCWDMLSTSETVCAVSAMRLVLRYGPFSGSALSNLIAVLRDRLADAVANLKV
PTWDTLVMRAVPDAARVAAYRFGMSIRLIRNICLFHEIFAMPVLEELVLDQLLSGKILPH
LRSIQSNIHDAVTRTERVVTSLHGVWAGPKATGDFSPKLRPLVDYLLSLARVLEKKHSSS
SGEIDTSKFARRLKKMLVELNQYDYARDISRTFNIKEAL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaaatcccgcaactttcgccgtcgtggcggcgacgacggcgacgatgatgaa
acctccgccaagaccaccaacggcaccgccgctaaacctacaaccaccgcttccgccacc
aaacccaaaaagaaaagtctacttagtttcgccgacgacgaagattccgacgatactccc
ttcgttcggccttcctccaaaccctcatccgcttcttcacgaatcacgaaaccctcttcg
tcatcttctgcgcacaagcttacttctggaaaagaccgaattacccctaaacctccttca
ttcacctccaatgtacaacctcaagctggtacttacaccaaggaagcgctccttgagctc
cagaagaacaccagaaccttagttggttctcgctctgcccaacccaaacccgagcccaga
cccgggcccgttgaaccagttatagtcttgaaagggcttgtgaaaccaccatttagtgtg
actgctcaaactcagcaaaatgggcaagagagtgaagatgacgaaatggatgttgatcaa
tttggtggtactgttaataggttgggttcaatggcattggagaaggattcgaggaagaag
gatgatgttgggtcagtaatacctgataagatgactattgatgcaatacgggctaagagg
gagaggctacgtcaagctcggcctgcggctcaggactttatagcattggatgaagggggt
aatcatggtgaagctgagggtttgagtgacgaggagccggagtttcagcagagaattggg
ttctatggggagaagattggtagtgggagaaggggtgtgtttgaggattttgaggataag
gcaatgcagaaagatggtggatttcgtagcgatgatgatgaggaagatgaggaggaaaaa
atgtgggaggaagagcaggttagaaaggggttaggaaaaaggttggatgatgggtctaat
agaggggtgatgagtagtgttgtaagcagtgcagctgcagttcagaatgttcagaaggcg
aatttcggaagttcggctgtaggagctagtgtatattcctcagtacaaagtattgatgtt
tctgatggtcctactattggaggaggagtggttggaggcttgcccagtttggatgcatta
tcaatttctaagaaggccgaggttgctaagaaagccttgtatgagagtatgggaagactc
aaagaatctcatggccgaactgtgacatcattgcataagactgaagaaaatttatctgcc
tcattgtcgaaagtcactacgctggaaaattctttgtctgctgctggtgagaagtacatg
tttatgcaaaagcttcgcgactttgtttctgttatatgtgcacttttgcaggataaaggc
ccttacattgaggaacttgaagaccagatgcagaaacttcatgaagaacgagcagccgct
atcttagaaaggagagctgctgataatgatgatgaaatgaaggaacttgaagctgctgta
agtgctgcaagacaagttctaagtagaggtgggagcaatgcagcaacaatagaagctgcc
acagctgctgctcagacttcaacagcagcaatgaggaaaggaggagacttacctatagag
ctagatgaatttggtagagataagaatctgcagaaacggatggatacaacaagaagggca
gaggctcggaaacgaaggagagtgaaaaatgatgttaaaagaatgtcagctataaaatgt
gatagctcttatcagaaaatagaaggagaatctagcaccgacgaaagtgactctgagagt
acagcatatcaatcaaaccgtgatcaattgcttcaggtttccgagcagatttttggtgat
gcacacgaggaatactctcaactgtctgtggttgttgaaaagtttgacagatggaagaaa
gattatgcctcaagctatcgtgatgcgtatatgtcacttagtatacctgttattttttca
ccctatgtgagactagagcttctgaagtgggatccactgcatgaaaacacagattttatg
gatatgaactggcacaattctctattcagttatggaattcccccagaaggtgaagccgaa
ataagtgttgatgatactgatgtcaatcttattcctcagttggtggagaagcttgcaata
cccattcttcataaccagttagctaattgctgggatatgcttagcaccagtgaaacagtg
tgtgctgtctctgccatgcgattggtattgagatatggccccttttctggctcagccctc
agcaatctgattgctgtacttcgtgatcgtctagctgatgctgtggctaatttgaaggtc
ccaacttgggacacccttgttatgagggctgtacctgatgcagcacgagttgctgcttat
aggtttggcatgtctattcgtttgatcaggaacatatgcttgttccatgagatttttgcc
atgcctgtcctggaagagctggttcttgatcaactcttaagtggaaagattcttcctcat
cttcgaagcattcagtcaaacattcatgatgctgtaacaagaactgaaagagttgtcact
tcactacacggtgtctgggctggccccaaagccacaggagacttcagtccaaagctacga
ccattggtggattacttgctctcacttgccagggtgctcgaaaagaagcactcatcaagc
agtggagagatagatacatctaaatttgctcgtcgattgaagaagatgcttgtagaactg
aatcaatatgactatgccagggatatatcaagaaccttcaacatcaaggaggccttgtga
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