Solanum tuberosum (potato): 102583338
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Entry
102583338 CDS
T02981
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102583338
03036 Chromosome and associated proteins [BR:
sot03036
]
102583338
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102583338
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102583338
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
102583338
microRNA pathway
RISC loading complex
102583338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
102583338
NCBI-ProteinID:
XP_006357979
LinkDB
All DBs
Position
Un
AA seq
903 aa
AA seq
DB search
MEISEGRESCCTPVEEPPPVIMSNAEPEGVDQPKRTIMMRPGDGTSGREISLLANHLKVS
IKCPDEIFYHYSVSITSDEKRAVNSKVIRRKIIDRLHETYSSEFAGKKFAYDGEKNLYTV
GPLPHNRLEFTVVVEESSARHASESPSDNGSLNHYSKRSKHSLHSKAFLVEIDYAAKIPL
RSVDLALQGADPENVQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFTDVGGGVMSC
RGFHSSFRPTDGGLTLNMDVSTTMILSPGPVIDFLLANQNVKEPRYIDWARAKRMLKNLR
VKAKHNNREFKIIGLTDRPCNQQLFSMKVKNGGSPDDGGETLEITVYEYFTKHRNIELSS
SVYMPCLDVGKPKRPNYLPLELCYLVSLQRYTKALSSVQRASLVEKSRQKPRERIKVITD
AVRDYSYDDDPFLVACGISIEKQLIQINGRVLEAPKLKVGNGEEVTPCDGRWNFKNKHLF
NPARIERWAVVNFSASCDTSHLSRELISCGRSKGIHFERPHTLIEEDPQYRRAGAVVRVE
QMFEEIIARLPGHPDFLLCVLPERKNSELYGPWKKKSLTDLGIVTQCISPLKITDRYLTN
VLLKINAKLGGTNSLLAMEHTSHLPLIKDTPTMILGMDVSHGSPGQSDIPSIAAVVGSLY
WPLISKYRAVVRSQSPKLEIIESLYKPLPNGDDEGIMRELLLDFYRTSNGHKPAQIIVFR
DGVSESQFSQVLNLELDQMIKAYNHLGEGGNPKFTLIVAQKNHHTKLFQANAVDNVPPGT
VVDTNIVHPRNNDFFMCAHAGMIGTTKPAHYHVLLDEIGFAPDVLQNLIHSLSYVYQRST
SATSIVAPVRYAHLAAQQFGQFDKFEDHSETLSEQGSVKSIGTTPVTELPRLHKNVSDSM
FFC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaaattagtgagggaagagagagttgttgcacacctgtggaagaaccgccaccagtc
ataatgtcaaatgcagagccggagggagttgatcagcccaagcgtactataatgatgagg
cctggggatggaacatctggacgagagatttctttgctcgcaaaccacctaaaagtttct
atcaagtgtcctgatgaaatattttaccattatagtgtctctataacttctgatgaaaag
agggccgttaacagcaaggtgattagaagaaaaattatagatagacttcacgaaacatac
tcgtctgaatttgctgggaagaaatttgcttatgatggagagaagaatttgtacactgtg
ggacctctaccacacaacagactggaattcacagtggttgttgaggagtctagtgcacgg
catgctagtgagagcccctcagataatggaagcctcaatcactacagtaaaaggtctaag
cattctctacattcgaaggctttcctggtggagattgactatgcagctaaaataccatta
aggtctgttgatcttgcccttcaaggagctgatccagaaaatgttcaagatgcattgagg
gttctagacattatattgcgacaacaagctgctaatagaggatgcctcttggttagacag
tcattttttcatgatgactcaaggaacttcacagatgttggagggggtgtaatgagttgc
aggggatttcattccagctttcgtccaactgatggtggcttgaccttgaacatggatgtg
tctacaactatgatcctatcacctggacctgtaattgattttttgcttgctaaccagaat
gtaaaggagcctcgttatattgattgggcaagagcaaaaagaatgttgaagaatctgaga
gttaaagctaagcacaacaacagagaatttaaaattatcggtttgactgacagaccttgc
aatcaacagttattttctatgaaggtcaaaaatggtggtagtccagatgatggaggagag
accctagagataactgtttatgagtatttcactaaacatcgtaacatagaactttcatcc
tcagtttatatgccatgtctggacgttggaaaaccaaaacgaccaaactatctgccactg
gagctgtgttatttggtctcccttcaaagatacacaaaggcattatcatcggtccagagg
gcatctttagttgaaaaatcaaggcagaagcctcgtgaaagaattaaagttataacagat
gctgtgagggactacagctatgacgatgatccctttcttgttgcttgtggaatctcaata
gaaaagcagctgattcaaattaacggcagggtccttgaagccccaaagttgaaggttggt
aacggcgaagaggtcactccctgcgacggcaggtggaattttaagaacaagcatcttttc
aaccctgcacgaattgaacgctgggcagtggtcaacttctctgccagttgtgatacaagt
cacctttcaagggagcttattagttgcggaaggagcaaaggcattcattttgagcgccca
catacgctcattgaggaagatccccagtataggcgagctggggctgtagttcgagtagaa
cagatgtttgaagagataatagctagactgcctggccatcctgatttcctcctctgtgtc
ttgccagagcggaaaaactcagagttatatggaccttggaagaaaaaaagtttgactgac
ttgggaattgttactcaatgtatctctccgttaaagatcactgatcgatatctaacaaat
gtgcttctcaaaataaatgcaaagcttggagggaccaattcattgttggctatggaacat
acctctcatctaccgcttattaaggacactccaacaatgatcctgggaatggacgtctct
catggatctcctggtcaatcagatattccatcaattgctgcggttgtgggatccttatac
tggccattaatatccaagtatagggcagttgtgcgcagtcaatctccaaagttggaaatt
atagaatccttatacaagcctttaccaaatggagacgatgaaggaatcatgagagaacta
cttctggacttctataggacaagtaacgggcataagccagctcaaattattgtcttcagg
gatggcgtcagtgaatcacagtttagtcaagttctgaaccttgagctagatcaaatgatc
aaggcatacaaccatcttggtgagggcggcaaccctaagttcaccttgatcgtggctcaa
aagaatcaccatacaaaactatttcaagctaatgcagttgataatgtaccaccaggtact
gttgtagacacaaatattgtgcatcctagaaataatgattttttcatgtgtgcacatgcg
gggatgattggaacaactaaacctgcacattatcatgtattgcttgatgagattggtttc
gcacctgatgtcttgcaaaatcttatacattcactatcatatgtgtaccaaaggagcacc
agtgcgacctctattgtggctcctgtgcgttatgcacacctagcagcacaacaattcggg
cagtttgacaagtttgaggaccactccgaaactttgtcagaacagggaagtgtaaaatca
attgggactaccccagtcaccgaactgcccaggttgcacaagaatgtcagcgactcaatg
tttttctgttga
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