Solanum tuberosum (potato): 102583363
Help
Entry
102583363 CDS
T02981
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102583363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102583363
Membrane trafficking [BR:
sot04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
102583363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
TraH
Motif
Other DBs
NCBI-GeneID:
102583363
NCBI-ProteinID:
XP_006343354
UniProt:
M1C203
LinkDB
All DBs
Position
Un
AA seq
790 aa
AA seq
DB search
MTPNGVEDEEKFLASGIAGIQQNAFHMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFKEETKRGCSIVELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSKDKLPDIGSEYEGDADTVVDAVEFVL
QNFTEMNKLWVRMQHQGPAQEKKKREKERSELRDLVGKNLHVLSQIEGIDLEMYKETVLP
RILEQVVNCKDEIAQGYLMDCMIQVFPDEYHLQTLETLLGACPQLQPSVDIKMVLARLME
RLSNYAALSTDVLPEFFQVEAFAKLNSAIGKVIEAQEDMPIAGVVTLYSSLLTFTLHVHP
DRLDYVDQILGACVKKLSGKGKLKDSIATKQIVALLSAPLEKYKDIDTALKLSNYPHVME
HLDDTTSKEMANVLVQTILKNKTCIATDEKVESLFELMKGLIRDLDENLHDEFDEEDFKE
EQNSVSRLIQMLHNDDPEEMLKIICTVKKHIVTGGPKRLPFTVPPLIFNSLKLVRRLQNQ
DENAPEEETSAIPKKIFQILNQIIEALSSVPVPELALRLYLECAEAANDSDLEPVAYEFF
TQAYILYEEEISDSKAQVTAIQLIIGTLQRMHIFGVENRDTLTHKATGYSAKLLKKPDQC
KAVYSCSHLFWVDDQDSIKDGERVLLCLKRALRIANAAQQMSNATRGSSGSVLLFIEILN
KYLYFYEKGVTQITVASIQSLIELITTEMQSENKTADPAADALLASTLRYIQFQKDKGGA
VGEKYESIKS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgacccctaacggagttgaagatgaagagaaatttctagcttctggaatcgccggcatt
caacagaatgcctttcacatgcatcgcgctcttgactcaaataatctgaaagatgcactc
aaatattcagctcagatgctgtcggagctccgaacttcaaggctatcacctcacaaatac
tacgagctatatatgcgggcttttgatgaattgagaaagctagaaatgttcttcaaggag
gagacaaagcggggttgctcaattgttgagttgtatgaactcgtgcagcacgctggcaac
attttgcctagactgtatctactttgcacagtggggtctgtgtacatcaaatccaaggag
gctcctgccaaggatatccttaaagacctggttgaaatgtgccggggtatacaacatcct
ttacgtggactctttctgaggagttacctttcccaagtgagcaaggataaattgcctgat
ataggttctgagtatgaaggagatgcggatactgttgtggatgctgtagagtttgtactc
caaaatttcacggaaatgaacaaactctgggttagaatgcaacatcagggacctgctcag
gaaaagaagaaacgcgaaaaagaaaggagcgagcttcgtgatcttgtcgggaagaacctg
catgttctcagtcaaattgagggtattgaccttgagatgtacaaagagactgtacttcca
aggattttagagcaggttgtcaactgtaaagatgagattgctcagggctatttgatggat
tgcatgattcaagtcttccctgatgaatatcatttacaaactcttgaaaccttattgggt
gcttgtccccagcttcagccatctgttgatatcaaaatggtgcttgctcggctgatggaa
aggctctcaaactatgctgctttaagtacagatgttttacctgagttttttcaagtggaa
gcttttgcgaaactaaatagtgccatagggaaggtgatagaagcccaagaagacatgcct
atagctggagttgtgactttatattcatctcttttaacttttactcttcatgtccaccct
gatcgccttgattatgtggatcagattttgggtgcatgtgttaagaagctttctggtaaa
ggaaagctcaaagacagtatagcaacaaaacagattgtggcccttctaagtgctccactg
gagaagtataaggatattgatactgcattaaagctttcaaattatcctcatgttatggag
caccttgatgatacaactagcaaagagatggctaatgttttagttcaaactattctgaaa
aataaaacttgcattgcaacagatgaaaaggttgagtctctttttgaattaatgaaagga
cttatcagagatttggatgagaatcttcatgatgagtttgacgaagaagatttcaaggaa
gagcagaactctgtttcacggcttattcaaatgcttcacaatgacgaccctgaggagatg
ctgaagataatttgcactgtgaagaagcatattgtgacaggaggaccaaagaggcttccc
tttacagtccctcccctcatttttaattctcttaagttggtaaggcgactgcaaaaccaa
gatgaaaatgctccagaggaagaaacatctgctatacctaagaaaatttttcagatttta
aatcagataattgaggctctctcaagtgtcccagtacctgaactagcactaaggttgtac
ctagagtgtgctgaggctgccaatgactctgatctagagcctgttgcctacgaattcttc
acccaagcttatatactatacgaagaagaaatttcggactctaaagcacaggtgactgca
atacaattaataataggtactcttcagagaatgcacatctttggtgttgagaacagggac
acgctaacgcacaaggctacagggtactccgcaaaactcctgaagaagcctgatcagtgc
aaagctgtctactcttgttcacatcttttctgggttgatgaccaggacagcatcaaggat
ggagagagggttttgctttgtttaaaacgagccttaaggattgcaaatgctgctcaacaa
atgtcgaatgcaacccgaggcagcagtggatcagtcttgctctttatagaaattctaaac
aagtatttatatttctatgagaagggtgtcacacagatcactgttgcatccatccagagc
ctaatcgagctaataacaactgaaatgcaaagtgaaaataaaacagccgatcctgctgca
gatgctttgctcgcaagcacattgcgctatatccagttccagaaggataaaggtggtgca
gttggtgagaaatatgaatccataaagtcttaa
DBGET
integrated database retrieval system
