Solanum tuberosum (potato): 102583584
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Entry
102583584 CDS
T02981
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00450
Selenocompound metabolism
sot00970
Aminoacyl-tRNA biosynthesis
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
102583584
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102583584
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sot01007
]
102583584
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sot03016
]
102583584
Enzymes [BR:
sot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
102583584
Amino acid related enzymes [BR:
sot01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102583584
Transfer RNA biogenesis [BR:
sot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102583584
Prokaryotic type
Other AARSs
102583584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
CoV_peptidase
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
102583584
NCBI-ProteinID:
XP_006361630
UniProt:
M1CSY7
LinkDB
All DBs
Position
Un
AA seq
812 aa
AA seq
DB search
MGDFSTAGNGDNLPPASPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYC
RLRDYNTIYMCGTDEYGTATETKALEENCTPKQICDKYHVIHREVYKWFDISFDHFGRTS
TPQQTEVCQAIFKKLWENNWLSENTMQQPYCETCKKFLADRLVEGSCPTPGCNYDSARGD
QCEKCGKLLNPTELKDPRCKVCRNTPCIRDTDHLFLELPLLKDELEAYVNDLSVAGGWSQ
NAIHTTYAWLREGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTTEW
EKWWKNPENVELYQFMGKDNVPFHTVIFPSTLLGTRENWTLMKTISVTEYLNYEAGKFSK
SKGVGVFGNDAKETNIPVEVWRYYLLTNRPEVSDTLFSWVDLQAKLNSELLNNLGNFVNR
VLSFIAKDPASGYGSIIPNPEGAESHPLTKALGEKVGNYVEQYIEAMEKVKLKQGLKIAM
SISGEGNGYLQESQFWRLYKEDKPSCSIVMSTASGLVYLLACLLEPFIPSFSREVLKQLN
FPPETQLSLSDERGDIEKSKRPWHILPAGHKIGIPTPLFKELKDEEVEFYREKFAGSQAE
RNLKAETEARKITDQLNKAKISDANKKKERATKSSEAKAKGSASVEAEISISRLDIRVGL
ITRAEKHPDADSLYVEEIDVGEAQPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPASMRGI
KSQAMVLAASNSDHTKVELVEPPKDAAIGERVTFPGFDGKADDVLNPKKKVWETLQVDLH
TNEELVACYKDLPLTTSVGVCKVTSISEGSIR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttctccaccgccggcaacggtgacaatctcccgccggcctctcccaaactt
ccgattcccggcaaaagaaacatcctcatcacaagcgctttgccgtatgtcaacaacgtt
cctcatctcggaaacatcatcggaagtgtgttgagtgcggatgtcttcgcgagatactgt
agacttcgggattacaataccatatacatgtgtggtactgatgaatatggcacagctaca
gagactaaagccttggaagagaactgtactcccaagcaaatttgtgacaaatatcatgta
atccatagagaagtgtataaatggtttgatataagcttcgatcactttggacgcacatca
actccgcaacagaccgaagtttgtcaggcgatcttcaaaaaactctgggagaataattgg
ctctccgagaacaccatgcaacagccgtactgtgagacatgcaaaaagtttttggctgac
cggcttgttgagggtagctgcccgacaccaggttgcaactatgattctgcaagaggagat
caatgtgagaagtgtgggaagctcttaaatcccactgaattgaaggatccaagatgcaag
gtttgccgtaacaccccatgcatccgagatacagatcatttgtttcttgagctccctttg
ctgaaggatgaattagaagcatatgtcaacgacctgtcagtggctgggggatggagtcag
aatgctatccacactacatatgcttggcttagagaaggactgaagccaaggtgtataact
agagacttgaaatggggggttccagttccacatgaaaaatataaggacaaggttttttac
gtgtggtttgatgctcctattggatatgtatctataacctcatgctacacaactgagtgg
gagaagtggtggaagaatccagagaatgtggagctctatcagtttatgggcaaagataat
gtgccttttcacactgtgattttcccatctacgcttcttggaactcgtgaaaactggact
cttatgaagactattagtgtaacagaatacttgaactatgaagcaggcaaattctcaaag
agcaagggcgtaggagtatttggtaatgacgcaaaagagacgaacattcctgtagaagtt
tggagatattacttgctgacaaacaggccagaggtgtcagacactttgtttagttgggtg
gatttacaagcaaagttaaacagcgagttgctaaacaacttaggcaatttcgtcaataga
gtcctgagtttcattgcaaaagatccggcttcaggttatggttccataattcccaaccct
gaaggagctgaatcacaccctttaactaaggccttaggtgaaaaagttggaaattatgtg
gaacaatatatagaagccatggagaaggttaaattaaagcagggcttgaagattgctatg
tccatttctggagaaggaaacggttatttgcaagagagtcaattctggagactttacaag
gaagataagccttcgtgttccatagtgatgagcactgcttccggcctagtatatcttctt
gcatgtcttttagagccatttataccatccttttcacgggaggtgcttaagcagcttaac
tttcctcctgaaacacaactttcactgtctgatgaaagaggtgacatagaaaaaagcaaa
agaccatggcatatcctacctgcaggtcacaaaattggtataccaacaccattgttcaaa
gaactgaaagatgaagaagttgaattctacagagaaaagtttgctggaagtcaggcagag
aggaatttgaaggctgaaactgaggcaaggaagatcactgatcagttgaacaaagcaaaa
atctcagatgctaataagaagaaagaacgtgctacaaaatcttctgaagccaaagctaag
ggttcagcctctgttgaagcagaaatttcgattagcagacttgatattcgtgttggtctc
attacaagagcagagaaacatcctgatgctgattctctgtatgttgaagagattgatgtt
ggtgaagctcagcctagaactgttgttagtggcctcgtaaaatatattcctctggaggaa
atgcagaatcgaaaggtctgtgttctatgcaacctaaaaccagccagcatgaggggcata
aaatcccaggcaatggttcttgctgcttctaatagtgatcacactaaggttgaactagtt
gagccacctaaagatgctgcaattggtgaacgagtaacgttccctgggtttgatggcaag
gccgatgacgtcttgaatcctaagaagaaggtttgggaaactcttcaggtggatctgcac
acaaatgaggagttggttgcttgctataaagatttgccactcaccacttctgttggtgtt
tgcaaggtcacatccatttctgaaggatcgattaggtaa
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