Solanum tuberosum (potato): 102584072
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Entry
102584072 CDS
T02981
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102584072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102584072
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102584072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
102584072
NCBI-ProteinID:
XP_006367563
LinkDB
All DBs
Position
Un
AA seq
200 aa
AA seq
DB search
MVSSAIVNTYPLSSYTFGTKEHKMEKDSSVADRLARMKVNYMKEGVRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANPPANQPNWKIGECVATWW
RPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRLQFNMIHQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgtcggctatagtgaacacatacccactctctagctatacatttggcacaaaa
gagcataaaatggagaaggattcatccgttgccgatcgccttgctcgtatgaaagtcaac
tacatgaaggagggagtaaggacaagtgttgaaggaattctcttggtacaagaacataac
catcctcatattcttcttctgcaaattgggaacacattttgcaagctcccaggtggacgc
ctaaagccaggagaaaatgaaatcgagggtttgaaaaggaaactctccagcaaacttgct
gctaatcctcctgccaatcagccaaattggaagataggtgagtgcgtggccacctggtgg
aggccaaactttgaaaccataatgtatccatactgtcctccacacataacaaaacctaag
gagtgtaagaagctctaccttgttcacttatctgaaagagagtactttgctgtccccaaa
aatcttaaacttcttgctgtgccattgtttgagctttatgacaatgttcagagatatgga
cctgtaatatctacaattcctcaacagctttccagattgcagttcaacatgatccatcaa
tag
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