Solanum tuberosum (potato): 102584107
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Entry
102584107 CDS
T02981
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102584107
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102584107
Spliceosome [BR:
sot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102584107
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
nSTAND_NTPase5
AAA_16
Motif
Other DBs
NCBI-GeneID:
102584107
NCBI-ProteinID:
XP_006357217
UniProt:
M1C2F9
LinkDB
All DBs
Position
Un
AA seq
1156 aa
AA seq
DB search
MTTLPILFPSLSPSNSIISRSPFPLLHIQTLRFCSVKSIQKNPFTSTSRIFYKFPSSIFP
AESQDEDEDEDEDDEDDDDEEAAEEYDDVYAEVSDGGEDSEDELESSVSSEIFNIEESRR
QRVEKLRNEVREFGDGIIDVNELASIYSFRIDKFQRLSIQAFLRGSSVVVSAPTSSGKTL
IAEAAAVATVARGRRLFYTTPLKALSNQKFREFCETFGESNVGLLTGDSAVNRDAQILIM
TTEILRNMLYQSVGIASSDGGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLIC
LSATVANPDELAGWIGQIHGRTELVTSTKRPVPLTWHFSTKTALLPLLDDKGTSMNRKLS
LNYLQYDESGSELYREEGSKRRKLRRRENDVRPLSKNDISNIRRSQVPQIIDTLWHLKAR
DMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQYPDAVRVSAVKGLR
RGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLTKRGDSGR
IQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLFSGLQPLVSQFTASYGM
VLNLVAGAKVTRRSTGLDEIKVTRAGRTLEEARKLIEQSFGNYVGSNVMLAAKEELARIE
KEIETLTSEISEEAIARKSQKLLTQSAYQEIAELEEELRAEKHLRTELRRKMELERVSSL
KPLLKEIGDGHLPFMSLHYTDSDGVQHLVAAVYLGKVDTLNTEKLKSMVWDNEAFALKTA
VENFELGDNGGEDVKPSYHVALGSDNSWYLFTEKWIRTVYRTGFPNAALTLADALPREIM
AELLDKADMQWQKLAVSELGGLWCMEGSLETWSWSLNVPVLSSLSEDDEVLQLSQAYNDA
VECYKSQRNKVSRWKKRIARTEGFKQYQKIIDSAKFTEEKIRRLKVRSKRLIGRIEQIEP
TGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGENELWLAMVLRNKLLLNLKPAQ
LAAVLGSLVSEGIRLRPWKNNSFVYEPSTTVLNIIDLLEEQKSSLLELQEKHGVNIPCCL
DSQFTGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQINAK
SASNVMDRPPISELAG
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactccctatcctcttcccttcactttctccttcaaactccataatcagtcgc
tctccatttccacttcttcacatacaaaccctacgattctgctccgtcaagtcaatccag
aagaatccgttcacttctacatctagaatcttctacaagtttccgagctcaatttttccg
gcggagtctcaagacgaagatgaagatgaagacgaagatgacgaagatgatgatgatgaa
gaagcagcggaagagtacgacgacgtttatgcggaggtttcggatggaggcgaagacagc
gaagatgaactggaaagttccgttagtagtgaaatatttaacattgaggaatcgagaagg
cagagagttgagaaactgaggaatgaagttagagagtttggtgatggaattattgatgtg
aatgaacttgcttctatttactcttttcgaattgacaaatttcagcgattgtcgattcaa
gcttttttgagaggttcatctgttgtggtgtctgcgcctacaagtagcggcaaaactttg
attgctgaagctgctgcagttgctacagtagctagaggaaggagactattctatactact
cctctaaaggctttatctaatcagaaatttcgagaattttgtgagacatttggtgaaagt
aatgtggggcttctcactggagattcagctgttaatagagatgctcagattttaattatg
acaactgagattttgcgcaatatgctataccagagcgtagggattgcttcctcagatggt
ggtcttcttcatgttgatgtaattgttttggatgaagttcactatttaagtgacatatct
cggggtactgtttgggaagaaatagttatttattgcccaaaggaagttcaacttatatgt
ctttcagcgactgttgctaatccagatgagttggctggatggattggtcagattcatggt
aggacggagttggtaacatcaaccaagcgtccagttccattgacttggcacttctccaca
aagacagctctattacctcttcttgatgacaaaggaacaagcatgaatagaaaactgtca
ctcaactacttacagtatgatgaatccggcagtgaactatacagggaggagggatctaaa
agaagaaaattaagaagacgtgaaaatgatgttcgtcctctttcaaagaatgatataagt
aatattcgacgctcacaggtacctcaaattatagacacactgtggcatctaaaggcaagg
gatatgcttccagcagtttggttcatctttagcaggaaaggatgtgatgcagctgtccaa
tatcttgaagactgcaggttactggatgagtgtgaaacgagtgaagttgaactggcactc
aagaggttccgtattcaataccctgatgctgtgcgtgtgtctgcagtgaaaggcctccgc
cgaggagtggctgcacatcatgctggctgtctccccctttggaaatcattcattgaagag
ttatttcagcgaggtctagttaaggttgtctttgctaccgaaacacttgctgctggcatc
aatatgcctgctagaacagctgtcatttcatctctcaccaaaaggggcgatagtggacga
atccagttaagctcaaatgaattattccaaatggctgggcgtgctggtcgtagaggtatt
gatgaaaagggtcacgtggttcttgttcagactccttatgaagggcctgaggagtgctgc
aaagttcttttttctgggcttcaacctcttgtctcacaatttaccgcctcgtatggaatg
gtgcttaatctcgtagcaggggccaaagttacccgtagatcaactgggttagatgagata
aaagtcacacgagcaggacggactttggaagaagcaaggaagttaattgaacagagtttt
ggtaattatgttggaagcaatgtcatgcttgctgcaaaagaggagcttgctagaatagaa
aaggaaatagagacacttacttcagaaatcagtgaggaagcgattgctagaaagagccag
aagctcttaacgcagtcagcatatcaggagattgctgaactcgaggaagaattaagagct
gaaaagcatcttcgaactgaactccgaagaaaaatggagctggaaagagtgtcctcattg
aaacctttgttaaaggagataggagatggacaccttccattcatgtctttgcactacacc
gacagtgacggggtacaacatttagttgctgctgtttatctggggaaggttgatactttg
aatactgaaaagcttaaaagtatggtgtgggacaatgaggcctttgcattaaagacagca
gtggaaaattttgaacttggtgataatggaggtgaagatgttaaaccgtcttatcatgtg
gctcttggttcagataactcttggtatcttttcacagagaagtggattagaacggtttac
agaacaggctttccaaatgctgccttaactcttgctgacgccttgcctcgtgaaattatg
gccgagcttcttgataaggcagatatgcagtggcaaaagttagctgtgtctgaacttgga
ggtctatggtgtatggaaggttctttggagacatggtcttggagtttaaatgttccagtc
ttgagtagtctatctgaagatgatgaggtcttgcaattatctcaagcatacaatgatgca
gtagaatgctacaagagccaaaggaataaggtctctcgttggaaaaaaaggatagctcgt
acagagggctttaaacagtatcagaagataattgactcagctaagttcactgaggaaaag
attcgccggttgaaggttaggtcgaagcgtttgattggtcgtatagagcagattgagcca
actggttggaaggaatttctgcaggtcagcaatgttatacatgaaagtagagcattggat
atcaatacacacgtcatattccccctaggtgaaactgcagctgcaattcgaggagaaaat
gaactttggcttgcgatggttcttcgaaataaattgttgctgaacttaaaacctgcacag
cttgctgcagttcttggtagtctagtttctgaaggcattaggcttcggccctggaaaaat
aacagtttcgtttatgagccctctaccactgtcttgaatatcatagacttactggaagaa
caaaaaagctcacttctagagcttcaggaaaagcatggagtaaatattccttgctgcttg
gatagccaattcactggcatggttgaagcctgggcatctggtcttacatggaaagagatt
atgatggactgtgcaatggatgaaggagatttggctcgccttctacggagaacgattgat
ttgttagctcaggttcccaaattgcctgatatagatccactgctgcaaatcaatgccaag
agtgcctctaacgtaatggaccggccaccaataagtgaattagcaggatga
DBGET
integrated database retrieval system
