Solanum tuberosum (potato): 102584212
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Entry
102584212 CDS
T02981
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102584212
03036 Chromosome and associated proteins [BR:
sot03036
]
102584212
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102584212
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
102584212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HTH_44
HHH_9
HHH_3
SH2
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
102584212
NCBI-ProteinID:
XP_006339248
UniProt:
M1CQD2
LinkDB
All DBs
Position
Un
AA seq
1643 aa
AA seq
DB search
MAGKNVISDDEDEVGMEEEERDEEPVDGDGVDEREDEDEDEEEEEGQDEYEKDGFIVDDV
EEEEDEDEDDRADSDDERQKKKKRKKRESERNYVLDEDDYELLQESNIAVPRPKLESKKF
KRLKKAQRDMEDEGSGFYEEEEFDGTGRRGRTAEQKLERSLFGDDEGQPLEDIAEEEERL
EEEEDADIGEEDEMADFIVDEEEVDEHGAPIRRKKVNKKKSRQAAGVSSSALQEAHDIFG
DVDELLMRRKQDRAKSSMHDESGEWSERRLEDEFDPTILAEKYMTEKDEHIRKIDVPERM
QIAEESTGPVPPETISVEESNWIYNQLAAGVVPLFKKKDSGKDSGTTDEEKELPIDKDDI
MRFLDLMHAQKFDVPFIAMYRKEECMSLFKDPEEDGTSDDGPKNSDKKPAVRWHKVLWAI
QDLDRKWLLLQKRKSALELYYKKRFQEESRRVYDETRLKLNQQLFESITNSLQASESERE
VDDVDSKFNLHFPPGEVGVDEGQYKRPKRKSQYSICSKSGLWEVASKLGYSAEQFGRHMS
LEKMGDELEDAREPPEEMASNFTCAMFETPQAVLKGARHMAAVEISCEPSVRKHVRTTYM
THAVVSTSPTPEGNTVIDSFHRFAEVKWLRDKPLSEFVDAQWLLIQKAEEEKLLQVTIKL
PEVHLNQLTTDSKEHYLSDGVSKSAQLWNEQRKLILEDAIFNFLLPSMEKEARSLLTSKA
KNCLLMEYGNVLWNKVSVGPYQRRENDLGSDEEPAPRVMACCWGHGKPATTFVMLDSSGE
VLDILYAGSLSLRGQNVNDEQRKKNDQQRLLKFMMDHQPHVVVLGAVNLSCTRLKEDIYE
IIFKMVEDNPRDVGHEMDNLNIIYGDESLPHLYENSRISADQLPTQSGIVRRAVALGRYL
QNPLSMVATLCGPGREILSWKLNTLESFLTPDEKYEVVEQVMVDVTNQVGVDLNLAISHE
WLFAPLQFISGLGPRKAASLQRSLVRQQTIFTRKDLLTEHHLGKKVFVNAVGFLRVRRSG
YTANSNTYIDLLDDTRIHPESYSLAQELAKDIYLKDMGEENNDDDEVLEMAIEHVKEKPH
LLRLVNAYEYAEDKNRFNKRETLNGIKLELMQGFQDWRRQYVEPSQDEEFYMISGESEET
LSEGRIVQATVRRVQPQKAICSLECGLTGILSKEDSSDDWRDVNDLTEKMREGDILTCRI
KSIQKNRYQVFLSCKENDLRNNRYQNNQNLDPYYHEDRTSLQTEKEKARKEKELAKKHFK
PRMIVHPRFKNITADEAVEFLSDKEPGESIVRPSSRGPSYLTLTLKVYDGVYAHKDIVEG
GKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKFKTGTKAEVD
ELLKIEKSEYPMRIVYSFGISHEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDI
DRLVAYFQRHIDDPHDSGPSIRSVAAMVPMRSPASGGSSGFGGGWGGSSNDSGRRGGQSG
DRDRSSGSGSRPGRNDYRNRSNQDDQSGLPPRPYGGGGRGRGRGRGRGRGNNDNDGQDSD
YGSQKWSSKEGGGGGWGEVQNSPARESWGGGGGSGGGGGSGDGGGWSASPSGGGGDSWGK
DTGGEAEDSGWGGGKKSGGSGGW
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaaaacgtgatctccgatgacgaagatgaagtcggaatggaggaagaggag
agggatgaagagccagttgatggtgatggagtggatgagcgggaggatgaggatgaagac
gaggaagaagaagaaggtcaggatgaatatgagaaagatggatttatagtggatgatgta
gaggaagaagaggatgaggatgaagatgatagagctgacagcgatgatgagaggcaaaag
aagaagaaaaggaagaaaagggagtcagagaggaattacgtgcttgatgaagatgattat
gaacttctacaggaaagcaatattgcggtgcctcgtccaaaacttgagagcaaaaagttc
aagcggctaaaaaaagctcagagggatatggaggatgagggttctggtttttatgaggag
gaggagtttgacggaactgggagacgagggcgtacagctgagcagaagctcgagcgtagc
ttatttggtgatgatgaagggcaaccactcgaggatattgctgaggaggaagaaaggctg
gaggaagaagaggatgctgacattggtgaggaagatgaaatggcagactttattgttgat
gaagaagaagttgatgaacatggtgctcctattagaaggaagaaggtaaacaaaaagaag
tccaggcaggcagcaggagtttcgtcctctgctctccaggaagcccatgacatatttggt
gatgttgacgaacttttaatgcgtcgaaaacaagatcgggccaaatcgagcatgcatgat
gaatccggtgaatggagtgaaaggagacttgaagacgaatttgatcctactattctagct
gagaaatatatgactgagaaggatgagcacattcggaaaatagatgtccctgaaagaatg
cagatagccgaggagagcactggtcctgtgccacctgaaaccatcagtgtggaagagagc
aactggatctacaatcagcttgctgctggtgttgtgcctctttttaagaagaaagatagt
gggaaagatagtggtacaactgatgaagagaaagagctaccaatagataaagatgacatt
atgagatttctggatttgatgcacgcgcagaagtttgatgtcccgttcattgccatgtac
cgtaaggaggaatgcatgagcttatttaaggacccagaagaggatggaactagtgatgat
ggccctaaaaattctgacaaaaaacctgcagtaagatggcataaggtgctttgggcaatc
caagatttagacagaaagtggctcctccttcagaagcggaagtctgcacttgagttgtac
tataagaagcgttttcaagaagagtcccgtagggtgtatgatgaaacacgtctaaagttg
aatcagcagctctttgaatcaattactaattcactccaggcgtctgagtctgaaagagag
gttgacgatgttgactcaaaatttaacttgcacttcccacctggagaggtcggtgtggat
gaaggacaatataagaggccaaagaggaaatcacaatacagtatttgcagcaaatccggc
ttatgggaagtggcgagcaagttgggatacagcgccgagcaatttggtagacatatgtct
ctagaaaagatgggggatgagctggaggatgctagggaaccaccagaagagatggcatcg
aacttcacctgtgcaatgtttgaaacacctcaagctgtgcttaaaggcgctagacacatg
gcagcagtagagataagctgtgaaccaagtgtccgtaaacatgtgcgtactacctatatg
acccacgctgtagtatcaacgagtccaactcctgaggggaatacagtgattgattccttc
catcgatttgctgaagtcaagtggttacgggataaacctctctccgaatttgtggatgca
cagtggcttctcatccagaaggctgaagaggagaaactcctccaagttactatcaagctg
cctgaagttcatcttaaccagctgacaactgactcgaaagagcattatctcagtgacggt
gtgagtaaatctgctcagttatggaacgaacagagaaagttaatacttgaggatgcaatc
ttcaattttcttctgccttcaatggaaaaggaagcaagatccttgctaacaagtaaagca
aaaaactgtcttcttatggaatatggtaatgttttgtggaataaagtgtcagttggacca
tatcaacgcagagagaatgatcttggctctgatgaagagcctgcacccagggttatggct
tgctgttggggccatggtaagccagcaaccacttttgtgatgttggattcgtcgggagag
gttttggatattctgtatgctggatctcttagccttcgtggccagaatgttaatgatgag
cagcggaagaagaatgaccagcagagactgttaaaattcatgatggaccaccaaccccat
gttgtagtcctgggagctgtaaatctgtcttgtacacggcttaaggaggatatttatgag
attattttcaagatggtggaggataatccaagagatgttggtcatgagatggataatctg
aacataatatacggagacgaatcccttccgcatctctatgagaattcccgcatttctgcc
gaccagcttcctacgcagtcaggtattgtgaggcgcgctgtggcattgggacgttatctt
caaaatcctttatcaatggtagcaacattatgtggaccagggagggaaattttatcttgg
aagctgaatactttagagagctttctcacaccagacgagaagtatgaggtggttgaacag
gttatggtggatgtaactaaccaggtgggtgttgatcttaatttggctataagtcatgaa
tggctatttgccccgctgcaatttatttcggggctgggtcccagaaaggcggcatctctt
caaagatccttggtaagacagcagacaatcttcacgaggaaggatctcttaactgaacat
catcttggtaaaaaggtatttgttaatgcagttggcttcttgcgagtacggcgcagtgga
tacactgcaaatagcaatacatatattgatttgttggatgatacaaggatccatccagaa
tcctatagtcttgcacaggagttggcaaaagatatttatcttaaagacatgggtgaagaa
aataatgatgatgatgaagtgcttgaaatggcaatagagcatgttaaagagaagccacat
ttgttgaggttggttaatgcttatgaatatgctgaagataagaatcgttttaataaaagg
gaaacccttaatggtataaagttggagctaatgcaagggtttcaagattggcgtagacag
tatgtggagccaagccaggatgaagagttctatatgatttctggtgagtctgaggagacg
ctttctgagggaagaattgtgcaggcaacagttcgtcgggttcaacctcagaaagctatc
tgttctctcgagtgtggattgactggtattctttccaaggaagattcttcagatgattgg
agagatgtcaatgatttgactgaaaaaatgcgtgaaggtgatatcttaacttgcagaatc
aagtcgatccaaaaaaataggtaccaggttttcctgagttgtaaagagaatgatttgaga
aataataggtatcagaataatcagaacttggatccatactaccatgaagatcgcactagc
ttacagactgagaaggaaaaagctcgtaaagaaaaggagcttgcaaagaagcatttcaag
ccaaggatgatagttcatcctcgattcaaaaatataacagccgatgaagctgtggagttc
ctctctgacaaggaaccgggtgaaagcattgtacgtcccagctcacgtggaccatcatat
ttgactttaactctcaaagtgtatgatggagtttatgctcacaaggatattgtggaaggt
ggaaaggaacataaggatataacaagcttgctgcgcatcgggaaaacactgaaaatagga
gaggatacttttgaagatttagatgaggtaatggatcggtatgttgatccattggtagct
catttgaaggcaatgctaagttaccgtaagtttaagacgggaacaaaggcagaagttgat
gagcttttgaaaattgagaaatctgagtaccctatgaggattgtctatagctttggtatt
tctcatgaacaccctgggacattcattttgacttatatacgaagttccaacccacaccat
gagtatgttggtttgtacccgaaaggatttaaattccgcaagaggatgtttgaagatatt
gatcgccttgtggcatattttcaaaggcatattgatgatccccatgactccggaccatca
atacgatcagttgcagcaatggtgcctatgcgcagccctgcaagtgggggctcctcagga
tttggtggcgggtggggtggttcatccaatgatagtggtcgaagaggtggtcagtctggg
gacagagataggtcttccggttcaggttctagaccaggtagaaatgactacagaaatcga
agcaatcaggatgatcaaagtggattgccaccaaggccctacggtggtggtggtcgtgga
cgtggtcgtggtcggggacgtggtagaggaaataatgataatgacggacaggattcagat
tatggctctcaaaagtggagttctaaggaaggtggaggaggaggttggggtgaagttcaa
aattcacctgccagggagtcttggggcggtggtggtggaagtggtggtggaggtggtagt
ggagacggaggtggttggagtgctagccctagtggtggcggtggggacagctgggggaag
gacactggtggtgaggctgaggattctggctggggtggcggtaaaaagtccggtggcagc
ggagggtggtga
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integrated database retrieval system
