Solanum tuberosum (potato): 102584255
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Entry
102584255 CDS
T02981
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102584255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102584255
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102584255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
102584255
NCBI-ProteinID:
XP_006364631
UniProt:
M1B9Z6
LinkDB
All DBs
Position
Un
AA seq
928 aa
AA seq
DB search
MRTRNQAKRQNQSTANEDSLKHYGEMESRSGCKDEASGNETLANISRGAVGKLLKRVNKS
RGSRGLKTDDSYLRKQDTMGEPENGSSEAEKQLTGTTVVRTTLDAKCCTTDVLQNVPLEV
ENGSTDVQCQSIEREDELDGIDWEDGPVDTLKSESNVKEDTINGVTVEFDATPDPSKQKT
VRRATAEEKELAELVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTDAPKL
TAKALAPLVNWCHSHFRVRGANDTEKPFHSALASTLESQEGTPEEVAALSVALFRALNLT
TRFVSILDVASLKPEIEKSYPSGKGPSRAGSGIFSSSTLMVVGPKCSPLSPAKSMAYGKH
NVSDKTLTSAGQATNDKSRETITDKSNKRMSASTSDAQGDSNDACIIKKERPKRKGDLEF
EMQLEMALSTTAVEIARNTMISDVKDVGSTSSNVSPFKKKKIKAEECSTSSHGISTAVGS
RKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGEQNVEAAAAACKLPLRYVVAFAGNG
AKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVVHFAQGATRSSLEDMEL
ETRELTEPLPTNQQAYRSHHLYIIERWLNKNQVLYPKGPVLGFCSGHPVYPRSCVRTLQR
KERWLREGLQVKANEIPAKVLKRSGKQNKGQDVEDDDYGEGDCEGTVALYGQWQTEPLFL
PPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLVPIAKRLQIDFSPAMVGFEFRNGR
SLPVYEGIVVCTEFKDAILEAYAEEEVRREAKERRRTEAEALSRWYQLLSSLITRQRLHN
RYVDGASSQSAVNIATSNEKSSLLAGGSENTRSAHQEKSEVAKSNTPSFVLAENHEHVFL
VEDQTVDEESSTRTKRCCCGFSVQYEEL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccagaaatcaggcaaagcgacagaatcaatcaactgcaaatgaagactctttg
aaacactatggtgagatggagagccgaagcggctgcaaagacgaagccagtggcaatgaa
actcttgcaaacatatctcgaggtgcagtggggaaacttttgaaacgagtcaacaagtca
cgtggctctcggggtctgaaaacagatgatagttacctacgcaaacaggataccatgggc
gagccagagaatggatcaagtgaggcagaaaagcagcttactggtactacagttgtaagg
actacattagatgctaaatgctgcactacagatgtgttacaaaatgtgccattggaagtg
gaaaatggaagtacagatgttcagtgtcagagtattgagagggaagatgaacttgatggt
attgattgggaagatgggccagtcgatactttgaagtccgaaagcaatgttaaggaagat
acaatcaatggtgtgactgttgagtttgatgctacgcctgatcctagtaaacagaagaca
gtacggcgagcaactgctgaagaaaaggaattggctgagcttgtgcataaggttaacttg
ctttgtttactagcaaggggcaggttggtagatagcgcttgcaatgatcctcttatccag
gcttctttactttcactgctgcccgcacatctgctgaagttgaccgatgctccaaaactt
actgcaaaggcactagctcctcttgtcaattggtgccacagtcatttccgtgttagaggt
gcaaatgatacggagaagccatttcattctgctttggcatcaactctcgagtcccaggaa
gggaccccagaagaggttgctgcattatctgtagccctgtttagggccttgaatcttact
accaggtttgtatcaatcttggatgtggcttctttgaagcctgaaattgagaaatcatat
ccctctggtaaaggccctagtagggctggtagcgggatatttagctcttcaacattgatg
gtggttggaccaaagtgttctcctctctctcctgctaaatcgatggcttatggcaagcat
aatgtttccgataagactttaacatctgctggccaagctaccaatgacaagtctagagaa
actattacagataagtctaataaaagaatgtcagcatcaacatcagatgctcagggtgat
tctaatgatgcatgtattataaaaaaagagcggccaaagagaaaaggggaccttgaattt
gagatgcagttggaaatggctctttctacgactgcagttgaaattgctaggaacactatg
atctcagatgtgaaggatgtaggaagtacttcatcaaatgtatcaccgttcaaaaagaag
aaaattaaagcagaagagtgttcaacttcctctcatggaatatcaactgctgttggatct
aggaaagtaggggcacctctatactgggcagaggtctactgcagtggtgagaacctgact
gggaagtgggtgcatgttgatgtcgtaaatgcaatcactgatggagagcaaaatgtggaa
gctgcagcagctgcatgcaagttgcctttaagatacgttgttgcttttgctggaaatgga
gctaaagatgtgacacgcaggtactgtacaaagtggtacaagatagcatctgaacgagtc
aactcaatttggtgggatgcagtattggcaccattaaaggagttggagtcggttgccacc
agtgatgtagttcattttgcacaaggagcaaccaggagctctctcgaagatatggagttg
gaaactagggaactgactgaacctcttccaacaaatcaacaggcttacagaagccatcac
ctatacataattgaaagatggcttaacaaaaatcaggtactctaccccaaaggacctgta
ttaggtttttgttctggtcatccagtatacccacgatcctgtgtacgaacactccaaaga
aaggaaagatggcttcgtgaggggctacaagtgaaagctaatgagataccggcaaaggtt
ctgaagcgttccggaaagcagaacaaaggacaggatgttgaagatgatgattatggcgag
ggagattgtgaaggaactgtcgctctctatggacagtggcaaactgaaccactgtttctt
cctcctgcagtaaatggcattgtacctaagaatgagcgtggtcaagtggatgtctggtct
gagaagtgccttccacctggtacagtccatttgagattgccaaggttggttcctatcgca
aaaaggctgcaaatagatttttcacctgctatggttggatttgaattccggaatggtcga
tctctacctgtttatgaggggattgtggtgtgtaccgagttcaaggatgcaattcttgag
gcatatgcagaagaagaggtgagaagagaggccaaagagcggaggaggactgaagcagaa
gctctttctaggtggtatcagcttctttcatcgcttattactcgacagaggctgcataat
cgttacgtagacggggcatcctcacaatcagcagtcaatattgcaacgtccaacgaaaaa
tcctccttactagctggtggcagtgagaacacgaggagcgctcatcaagaaaaatctgag
gttgccaagtctaatactccatcatttgtacttgcagaaaaccatgagcatgttttccta
gtagaagatcagactgttgatgaagaaagttcaacaaggacgaaacgatgttgttgtggc
ttttcagttcaatatgaggagttgtag
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