KEGG   Solanum tuberosum (potato): 102584255
Entry
102584255         CDS       T02981                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    102584255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sot03400]
    102584255
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      102584255
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_2 BHD_1 Transglut_core
Other DBs
NCBI-GeneID: 102584255
NCBI-ProteinID: XP_006364631
UniProt: M1B9Z6
LinkDB
Position
Un
AA seq 928 aa
MRTRNQAKRQNQSTANEDSLKHYGEMESRSGCKDEASGNETLANISRGAVGKLLKRVNKS
RGSRGLKTDDSYLRKQDTMGEPENGSSEAEKQLTGTTVVRTTLDAKCCTTDVLQNVPLEV
ENGSTDVQCQSIEREDELDGIDWEDGPVDTLKSESNVKEDTINGVTVEFDATPDPSKQKT
VRRATAEEKELAELVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTDAPKL
TAKALAPLVNWCHSHFRVRGANDTEKPFHSALASTLESQEGTPEEVAALSVALFRALNLT
TRFVSILDVASLKPEIEKSYPSGKGPSRAGSGIFSSSTLMVVGPKCSPLSPAKSMAYGKH
NVSDKTLTSAGQATNDKSRETITDKSNKRMSASTSDAQGDSNDACIIKKERPKRKGDLEF
EMQLEMALSTTAVEIARNTMISDVKDVGSTSSNVSPFKKKKIKAEECSTSSHGISTAVGS
RKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGEQNVEAAAAACKLPLRYVVAFAGNG
AKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVVHFAQGATRSSLEDMEL
ETRELTEPLPTNQQAYRSHHLYIIERWLNKNQVLYPKGPVLGFCSGHPVYPRSCVRTLQR
KERWLREGLQVKANEIPAKVLKRSGKQNKGQDVEDDDYGEGDCEGTVALYGQWQTEPLFL
PPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLVPIAKRLQIDFSPAMVGFEFRNGR
SLPVYEGIVVCTEFKDAILEAYAEEEVRREAKERRRTEAEALSRWYQLLSSLITRQRLHN
RYVDGASSQSAVNIATSNEKSSLLAGGSENTRSAHQEKSEVAKSNTPSFVLAENHEHVFL
VEDQTVDEESSTRTKRCCCGFSVQYEEL
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgcgaaccagaaatcaggcaaagcgacagaatcaatcaactgcaaatgaagactctttg
aaacactatggtgagatggagagccgaagcggctgcaaagacgaagccagtggcaatgaa
actcttgcaaacatatctcgaggtgcagtggggaaacttttgaaacgagtcaacaagtca
cgtggctctcggggtctgaaaacagatgatagttacctacgcaaacaggataccatgggc
gagccagagaatggatcaagtgaggcagaaaagcagcttactggtactacagttgtaagg
actacattagatgctaaatgctgcactacagatgtgttacaaaatgtgccattggaagtg
gaaaatggaagtacagatgttcagtgtcagagtattgagagggaagatgaacttgatggt
attgattgggaagatgggccagtcgatactttgaagtccgaaagcaatgttaaggaagat
acaatcaatggtgtgactgttgagtttgatgctacgcctgatcctagtaaacagaagaca
gtacggcgagcaactgctgaagaaaaggaattggctgagcttgtgcataaggttaacttg
ctttgtttactagcaaggggcaggttggtagatagcgcttgcaatgatcctcttatccag
gcttctttactttcactgctgcccgcacatctgctgaagttgaccgatgctccaaaactt
actgcaaaggcactagctcctcttgtcaattggtgccacagtcatttccgtgttagaggt
gcaaatgatacggagaagccatttcattctgctttggcatcaactctcgagtcccaggaa
gggaccccagaagaggttgctgcattatctgtagccctgtttagggccttgaatcttact
accaggtttgtatcaatcttggatgtggcttctttgaagcctgaaattgagaaatcatat
ccctctggtaaaggccctagtagggctggtagcgggatatttagctcttcaacattgatg
gtggttggaccaaagtgttctcctctctctcctgctaaatcgatggcttatggcaagcat
aatgtttccgataagactttaacatctgctggccaagctaccaatgacaagtctagagaa
actattacagataagtctaataaaagaatgtcagcatcaacatcagatgctcagggtgat
tctaatgatgcatgtattataaaaaaagagcggccaaagagaaaaggggaccttgaattt
gagatgcagttggaaatggctctttctacgactgcagttgaaattgctaggaacactatg
atctcagatgtgaaggatgtaggaagtacttcatcaaatgtatcaccgttcaaaaagaag
aaaattaaagcagaagagtgttcaacttcctctcatggaatatcaactgctgttggatct
aggaaagtaggggcacctctatactgggcagaggtctactgcagtggtgagaacctgact
gggaagtgggtgcatgttgatgtcgtaaatgcaatcactgatggagagcaaaatgtggaa
gctgcagcagctgcatgcaagttgcctttaagatacgttgttgcttttgctggaaatgga
gctaaagatgtgacacgcaggtactgtacaaagtggtacaagatagcatctgaacgagtc
aactcaatttggtgggatgcagtattggcaccattaaaggagttggagtcggttgccacc
agtgatgtagttcattttgcacaaggagcaaccaggagctctctcgaagatatggagttg
gaaactagggaactgactgaacctcttccaacaaatcaacaggcttacagaagccatcac
ctatacataattgaaagatggcttaacaaaaatcaggtactctaccccaaaggacctgta
ttaggtttttgttctggtcatccagtatacccacgatcctgtgtacgaacactccaaaga
aaggaaagatggcttcgtgaggggctacaagtgaaagctaatgagataccggcaaaggtt
ctgaagcgttccggaaagcagaacaaaggacaggatgttgaagatgatgattatggcgag
ggagattgtgaaggaactgtcgctctctatggacagtggcaaactgaaccactgtttctt
cctcctgcagtaaatggcattgtacctaagaatgagcgtggtcaagtggatgtctggtct
gagaagtgccttccacctggtacagtccatttgagattgccaaggttggttcctatcgca
aaaaggctgcaaatagatttttcacctgctatggttggatttgaattccggaatggtcga
tctctacctgtttatgaggggattgtggtgtgtaccgagttcaaggatgcaattcttgag
gcatatgcagaagaagaggtgagaagagaggccaaagagcggaggaggactgaagcagaa
gctctttctaggtggtatcagcttctttcatcgcttattactcgacagaggctgcataat
cgttacgtagacggggcatcctcacaatcagcagtcaatattgcaacgtccaacgaaaaa
tcctccttactagctggtggcagtgagaacacgaggagcgctcatcaagaaaaatctgag
gttgccaagtctaatactccatcatttgtacttgcagaaaaccatgagcatgttttccta
gtagaagatcagactgttgatgaagaaagttcaacaaggacgaaacgatgttgttgtggc
ttttcagttcaatatgaggagttgtag

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