Solanum tuberosum (potato): 102584418
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Entry
102584418 CDS
T02981
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sot03036
]
102584418
03400 DNA repair and recombination proteins [BR:
sot03400
]
102584418
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
102584418
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
102584418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
TPR_DNAAF5
Xpo1
DegR
Motif
Other DBs
NCBI-GeneID:
102584418
NCBI-ProteinID:
XP_006352318
LinkDB
All DBs
Position
Un
AA seq
1661 aa
AA seq
DB search
MASKLQLQLKELGSKLDNPPTSKDSLIKLLKQGSTFLSELEQSPPKAMLEAMQPLQSAIV
KPELLKHQDREVKLLVATCICEITRITAPEAPYSDDVLKDIFHLIVSTFSGLGDINSPSF
GRRVVILETLARYRSCVVMLDLECDDLINEMFQTFLNVVRDEHQDSILTSMQTIMVVLIE
ESEDIREDLLHVILSVLGRHKKGVSIAGRGLAMKVIEQCSGKLEPSIKQFLVSSMSGDSR
PTTFEIDYHEVIYDIYRCAPQILSGVVPYITGELLTDQLDVRLKAVHLVGDLFALSESAI
SEAFHPIFLEFLKRLTDRIVEVRMSVLEHVKGCLLSNPFRQEAPQIISALRDRLLDYDEN
VRKQVVVVLCDAACNALTSMKVDTIKLVAERIRDKSLLVKRYTLERLADIYRIYCLNSSS
GSIKGVDYDWIPGRILRCFYDKDFRSDIVEHILCSSLFPNEFSVKDKVKNWVKVFSSFDK
VEVRALEKLLEQKQRLQQEMRRYLSLRQMQQDGDATEIQKKVVFCFRIMSRCFTDPGKAE
ESFQILDQLKDANVWRILTVLLDPNSSSIRASSSRDELLKILGEKHRLYDFLGTLSMKCS
YILFNKEHVKEILQETNIQKSAGSTDLILSCTHLLVILARFCPFLLSGIEEDLIHLLEDD
NEIIKEGVLHVLAKAGAAIREKLGDSSRSLDLMLERICLEGSRRQAKYAIHALASIMKDD
GLKSLSVLYKRLVDMLEEKSHLPAVLQSLGCIAQTAMPVFETREKEIEQFIKKNILELSH
TSEGKAKESWEDRSEICSMKIFGIKTLVKSYLPVKDANLRLGIDDLLGILKNILSFGEIS
IQIKSSSVDKAHLRLAAAKAMLRLSKHWDHKIPVDVFYLTLGTSEASFPQVKKLFLNKIH
QYLKDRYLDPKYTCAFLLDLQFQQPDFEEIKSNLSDVIQIYQQGKARQLSVQSEAITPVP
YPEYILPYLVHALAHHSSFPNIDECKDVKVFEPTYRQLHVFLSMLVHGDEEGKPEGGISR
EKESISTIKSILHSIKHSEDVVDSTKSKNSYAVSDLGLAITNRLVPNHDDLKELKASVSL
PPSLYKQHEKNEEKDQSLVEVKTWLADEGIMVHFESIKFETNGTLKSEITEDEAMKDSET
EGNEVPLGKIMERLKARSKMRKEVKDDSSPAEVRTENDVDILKVVREIDSNNVVDDNKLD
ASNGHESAVKTKASNKRQKRKTGTDISVPKGAKRQRSSSSSVHKLSSKLKDSIEKEEDLQ
SMSEDKSSEENVFEPEEPDLLTSSIRKKTSLPPKQKRKATDKNHDDTHEIGMDSREVKKI
KGNTEAVNTHMQGNNKSGSHKKSKKKSVSGLAKCTSKDDTTPTVDLIGCRIKIWWPMDKK
FYEGVVKSFDTHKSKHVVLYDDGDVEVLRLEKECWEVVGGVQKPAKGSNSKKGSGYKKES
GERKNRTLAASRQKKETDKMSPLSPVRGKRTPRKNLKYGQKGPSKSSLSRRSLLLGKPLT
TSKSKADNLSSGESESEQKESTHGFSLSEHELSDKDDISYSDGKPGADADRLSGMEESEE
EECPMENKDEDEPGTPQDSRGSDREISSSHEKPHADGSTEKSNDVAERSDSHGSVRDDAD
SHSTDQGDSESSSAAKSDEELSDNELLSTWKQRAGKSVGGK
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaagctccaactccagctcaaggagctcggatccaagcttgacaaccctcct
actagtaaagactctcttatcaaactcttaaagcaaggttcaacatttctttctgagttg
gagcagtcgccgccaaaagctatgttggaagccatgcagcccttacaatctgctatagtt
aaaccagaactcctaaagcatcaagatagggaggttaagcttcttgttgccacctgtatc
tgtgagataacaagaattactgcacctgaagcaccgtacagtgatgatgttctaaaggac
atcttccatttgattgtgagcactttcagcggcttaggtgatataaatagtccatccttt
ggaagaagagttgtcatcttagaaactctagcaaggtacagatcatgtgttgtaatgctg
gatctcgagtgtgatgatcttatcaatgaaatgttccagacttttctcaatgttgtcagg
gatgagcatcaagatagtattctgacatcaatgcaaactattatggtcgttctcatagaa
gagagtgaagatatccgggaggatcttttacatgtcattttgtcggttctaggtcgtcat
aagaaaggtgtttcgatagccggaagggggcttgctatgaaggtgatagagcagtgttct
ggaaaattggagcccagcataaagcagtttcttgtatcttcaatgtctggagacagcagg
ccaacaacatttgaaattgactaccatgaagtcatttatgatatttaccgttgtgctcct
cagatcttatcaggagttgttccctacatcacaggagaactactgacagatcagttggat
gtacgattaaaagctgtgcacttagttggggatctttttgctctatcagaatctgccatc
tctgaggcatttcatccgattttcttggaatttttgaagagacttactgatagaatagtt
gaggtcagaatgtctgtccttgaacatgtcaagggatgtctgctgtcaaatccatttaga
caagaagcacctcagatcatctctgccctccgggaccggctgttggattatgatgaaaat
gtgcgcaaacaagttgttgtcgtgctttgtgatgctgcatgtaatgcccttacatccatg
aaggttgatacaattaagctggtagcagagcggattcgggataaatctcttcttgttaaa
agatacacactggagaggctagctgatatatacagaatctattgcttaaactcttccagt
ggctcaattaaaggcgtcgactatgattggatccctggaaggattttaagatgtttttat
gacaaagatttcagatcggacatcgttgagcacattctatgctcatccttgttccctaat
gaattctcagtcaaggataaagttaaaaactgggttaaggttttctcaagttttgacaaa
gttgaggttagagcacttgagaagctgctggagcagaaacaaaggttgcagcaagagatg
aggaggtatctttctttaaggcagatgcagcaggatggcgatgccactgagattcaaaaa
aaagttgtattttgcttccgcattatgtctcgttgttttactgatcctgggaaggcggaa
gagagctttcagattcttgatcagttaaaagatgctaatgtctggaggatattaacagtt
ctccttgatccaaacagcagctctattcgagcttctagttctcgggatgaattgcttaag
atccttggtgaaaagcatcggctctacgacttcctgggcacactttctatgaagtgctca
tatatacttttcaacaaggaacatgtaaaagaaattctccaggagactaacatacagaaa
tctgctggaagcactgatttgattctgtcttgcacacatcttcttgtgattcttgcacgt
ttctgtccatttctacttagtggaattgaggaagatttgatacatcttcttgaagatgat
aatgagataattaaagaaggtgtcttgcatgttttggcaaaggctggtgcagccatccga
gaaaaattgggagattcttcaaggtctttagaccttatgcttgagaggatttgcttggag
ggaagccggaggcaggccaagtatgctatacatgcacttgcatcaataatgaaggatgat
ggactcaagtcattgtctgttctatataagagacttgttgatatgctagaagagaagtca
catttacctgctgtactacaatctcttggatgtattgcacagactgctatgccagtcttt
gagacaagggagaaagagattgagcagttcataaagaaaaacatattggagcttagtcat
acatctgaaggtaaagccaaagaaagttgggaggaccgaagtgaaatctgttcaatgaag
atatttggaattaagacactggtcaaaagctatttaccagtgaaggatgctaaccttcga
ttggggattgatgacttgttgggaatcctgaaaaatatactctcttttggggaaatctca
attcaaattaagtcaagttctgttgataaggcccatttaagacttgctgcagcaaaagct
atgcttcgtctatcaaagcactgggaccacaagattcctgtggatgtcttttaccttact
cttgggacatcagaggctagtttccctcaagtaaagaagttattcctcaacaaaatccat
caatacctgaaggatcgttatttggacccgaagtatacttgtgccttcttacttgacttg
cagtttcagcagccagattttgaagagatcaagagcaacttaagtgatgttatccagatc
tatcagcaggggaaggcacgtcaactttctgtgcaatctgaagctattaccccagttcct
tatccagaatatattctaccatacttggtccatgctcttgctcatcattcttcatttcct
aacatcgacgaatgcaaggatgtcaaagtatttgagcctacttataggcaattgcacgtt
ttcctctcaatgttggtgcatggagatgaagaggggaaacctgaaggtggtatcagtaga
gagaaggaaagcatttcaacgattaagtctatccttcacagtataaaacattcagaagat
gtagtagattccacaaaatcaaagaactcatatgctgtctcagaccttggcctggcaatt
acaaatcggttagttcctaaccatgatgatcttaaggagttgaaagcatcagtatcacta
cctccatcgctttacaaacaacatgagaagaatgaagagaaagaccagtctctggttgaa
gttaagacatggttggcagatgagggcatcatggttcactttgaatcaatcaagtttgaa
actaacggaacactgaagtcagaaatcactgaagacgaagccatgaaagacagtgaaact
gaaggaaatgaggtgcctttaggaaaaataatggaacggcttaaagctagatctaagatg
cggaaagaggtgaaggacgactcttcacctgctgaggtgagaactgaaaatgatgttgac
atcttgaaagtggtgagggagatagattcaaataatgttgttgatgataataagttggat
gcaagcaatggccatgaatctgcagtcaaaactaaagccagcaataaacgtcagaaaaga
aaaacaggaactgatatttctgtaccaaaaggtgcaaagcgacaaaggtcatcttcttct
tcggtccataaactttcttcgaaactcaaggattctattgaaaaggaggaggatcttcaa
tccatgtcagaagataagtcctcggaggaaaatgtttttgaacctgaagagccggaccta
ttaacatcatctatcaggaagaaaacaagtctcccacctaaacaaaagcgtaaagctact
gataagaaccatgatgacactcatgaaattggaatggacagccgtgaagtgaaaaaaatt
aaaggaaacacagaagcagttaatacacatatgcaaggtaataacaagtcaggatctcat
aagaaatcgaagaagaaaagtgtatctggactggccaagtgcacgtcaaaggatgataca
actcccactgtggacttgattggttgcagaataaaaatttggtggcccatggataagaaa
ttctatgaaggtgttgtcaagtcttttgacactcataaaagcaaacacgttgtgctatat
gatgatggtgatgtagaagtcctccgattggaaaaggagtgttgggaggttgttggtggt
gtgcagaaacctgcgaagggttcaaattccaaaaagggttcaggctacaagaaagaatct
ggagagaggaaaaataggactcttgctgcctccaggcaaaagaaggagacagataagatg
tctccattatcgccagtacgagggaagagaactccaaggaagaacttaaagtatggacaa
aaaggtccatcaaaatcttctttgagcagaagaagcctgcttttaggcaagccgttgaca
acctcaaagtccaaggcagacaatttaagctcaggtgaatcagaaagtgagcagaaagaa
agcacgcatgggttcagtttgtctgaacatgaactgtctgacaaggatgacatatcatac
tctgatgggaaaccaggggctgatgctgataggttgagtggtatggaggagtctgaagaa
gaagaatgtcccatggaaaataaagacgaggatgaacctggcacccctcaggattctcgt
ggatcagacagggagatctcttcttcacatgagaaaccacatgcagatggatctacagag
aagtcgaatgatgttgctgaaagatcagattctcatgggagtgtaagagatgatgcagac
agtcattcaactgatcaaggcgactctgaaagtagctctgctgctaaatctgatgaagaa
ttatccgacaatgagctacttagcacgtggaaacaacgagcagggaagtcggttggaggg
aagtaa
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integrated database retrieval system
