Solanum tuberosum (potato): 102584645
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Entry
102584645 CDS
T02981
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102584645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102584645
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
102584645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
FtsJ
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
102584645
NCBI-ProteinID:
XP_006353900
UniProt:
M1AMW1
LinkDB
All DBs
Position
Un
AA seq
314 aa
AA seq
DB search
MVAPTRGRGGGGFRGGRGDGGGRGGRGGRGGFSGGRGGFGSGGSGMKRGGGRGGRGDRGG
RGGGRGRGGMKGGSRVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDG
TKVEYRVWNPFRSKLAAAILGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPDGVVYA
VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN
ASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQADQFKPVEQVTLEPFERDHACV
VGTYRVPKKQKAAA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaccaactagaggtcgtggtggtggtggattcaggggcggaagaggagatgga
ggaggaagaggaggacgaggtggtagaggtggttttagtggtggaagagggggttttgga
agtggaggaagtgggatgaagcgaggaggaggtagaggaggtagaggagacagaggtgga
agaggtggaggaaggggacgtggaggaatgaagggtggtagtagggttgtggtggagcct
catagacatggaggcgtgttcattgctaagggcaaggaagatgctctttgtactaagaat
ttggtacctggtgaagctgtctacaatgaaaagagaatctctgttcagaatgaagatgga
actaaggttgaatacagagtgtggaaccctttccgttctaagttagcagctgcaattctt
ggaggagttgatgatatctggattaaaccaggtgctcgagtcctttacctgggtgctgct
tcaggaacaacagtatctcatgtctcagaccttgttggacctgatggggttgtatatgct
gttgaattttctcacagaagtggaagggacttggtgaacatggctaagaaacgtactaat
gttattcccattattgaggatgctagacacccagccaaatacagaatgttggttggaatg
gtggatgtgatattttctgatgttgctcaacctgatcaggcaagaattttagctctgaat
gcatcatacttcttgaaagctggaggtcactttgttatctcaataaaggcaaactgcatt
gattcaacagtgccagcggaagccgtatttgctcaggaagtgaagaagctacaagctgat
cagtttaaaccagtggagcaggttactcttgaaccttttgaaagagaccacgcttgtgtt
gttggtacctatcgtgtaccaaagaagcaaaaggctgctgcctag
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