Solanum tuberosum (potato): 102585223
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Entry
102585223 CDS
T02981
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102585223
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sot01007
]
102585223
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sot03016
]
102585223
Enzymes [BR:
sot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
102585223
Amino acid related enzymes [BR:
sot01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
102585223
Transfer RNA biogenesis [BR:
sot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102585223
Prokaryotic type
102585223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF724
FapA
Peptidase_S64
DUF3490
Motif
Other DBs
NCBI-GeneID:
102585223
NCBI-ProteinID:
XP_006363290
LinkDB
All DBs
Position
Un
AA seq
507 aa
AA seq
DB search
MVLHCCFTGTTLHSLKLAAIPYFSRTLTSRLTPYYPRPLFPLAVRSLSAASSAATSTDEY
QVVKPQWKAAIDFKWIRDNKESVAVNIKNRNSNANLEIVLELYEKLLSVQKEVEKLRAER
NAVANKMKGKLEPSERQKLIEEGKNLKEELVTLEEDLLKLTDELQQEAQSIPNMTHPDVP
LGGENSSTVRKMVGKPAEFSFAVKDHVQLGKELDLFDFDAAAEVSGSKFYYLKNEAVILE
MGLVNWAVSEAMKRGFTPLTTPEIVRSSVVEKCGFQPRGTNTQVYSIENSDQCLIGTAEI
PVGGIHMDSILSESSLPLKYVAFSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPDE
SDSYHEELIEIEEELFSSLGFHFKTLDMASEDLGAPAYRKFDVEAWMPGLGRYGEISSAS
NCTDYQSRRLGIRYRPESSSSASPKKGKNAAPTQFVHTLNATACAVPRMIVSLLENFQQE
DGSVIIPEPLRPFMGGLQIIKPKHIQN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggtactgcactgctgcttcaccggaactaccctccattccctcaaacttgctgcaatt
ccttacttctccagaaccctaacctctcgtctaacgccctactatccaaggccgctgttc
cctcttgccgttagatccctttctgccgcctcctccgccgccacctccacagacgagtat
caagtggtgaagccccaatggaaagctgcaattgatttcaagtggataagagataataag
gagtcagttgcggttaatattaagaataggaactccaatgctaatctggagattgttctc
gagctctacgagaagttgctcagtgttcagaaggaggttgaaaagttacgagcagagaga
aatgcagttgcaaacaagatgaaaggaaaactagaaccctcagaacgccaaaagctcatt
gaagaaggaaagaatctgaaggaagaacttgttactttggaagaagacctactaaaacta
acagatgagctgcagcaagaagcacaatccatacctaatatgacacatccagatgttcca
ttaggaggggaaaattcttcaacagtcaggaaaatggttggtaagcctgctgagtttagc
tttgctgttaaggaccacgtccagctgggaaaagagctagatctgtttgattttgatgct
gcagctgaggtcagtgggtcgaaattctattacttgaagaatgaagcagttattttagag
atgggtcttgtaaactgggcagtttccgaggccatgaaaagaggttttacacctctgaca
actcctgagattgtacggtcatctgtagtggaaaaatgcggatttcaaccccgtggaaca
aacactcaggtgtactccatcgaaaatagtgatcagtgcctgattggcaccgctgaaatt
ccagtaggcggaatacatatggactccattctgtctgagtcttcattaccattgaaatat
gtggcgttctcgcattgcttccggacggaggctggtgctgcaggagctgcaactagggga
ctttatcgagttcaccagttcagcaaggtggagatgttcatactatgccgaccagatgaa
agtgattcataccatgaagaactcattgaaattgaagaagagctcttctcatcgcttgga
tttcatttcaagacactggacatggcatctgaggatctaggtgcaccagcatatcgtaaa
tttgatgtggaggcctggatgccaggattgggccgttatggtgagatatcaagtgcatca
aattgtacagattatcaaagccggcggctgggaataagatatcgccccgaatcatcatca
tcagcaagtcctaaaaagggcaaaaatgcagctccgacacagttcgttcacacactaaat
gctacagcatgtgcagttcctcgaatgatagtttccttgcttgagaatttccagcaagaa
gatggctcagttattattccagagccactgagaccattcatgggtgggcttcagattatt
aaaccaaaacatatacagaactga
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