KEGG   Solanum tuberosum (potato): 102585307
Entry
102585307         CDS       T02981                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102585307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sot03036]
    102585307
Chromosome and associated proteins [BR:sot03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     102585307
    NSL complex
     102585307
   HMT complexes
    COMPASS/SET1 complex
     102585307
    COMPASS/SET1 complex (yeast)
     102585307
    MLL-HCF complex
     102585307
    MLL3/MLL4 complex
     102585307
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102585307
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 eIF2A Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_like RMC1_N Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_HPS5 WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_DCAF12 VPS8_N Beta-prop_VPS8 Ge1_WD40 Big_7 DUF5888 PALB2_WD40 WDR54 Cytochrom_D1 HPS6 PKD Beta-prop_NOL10_N PQQ_2 KNTC1_N ZP1_ZP4_Ig-like
Other DBs
NCBI-GeneID: 102585307
NCBI-ProteinID: XP_006357747
UniProt: M1D0K0
LinkDB
Position
Un
AA seq 314 aa
MASPTETSESFKPYELKFTLSGHKRAISSVKFSDDGKILATSSADKTARTWDVSDGSLLH
EFLGHEQGISDVAFSSDGRHLVTASDDKTVRLWDVSTGSHIKTLTGHTNYVFCVNFNPQA
NMLVSGSFDETVRLWDVKTGKCLKVLPAHSDPVTAVNFNRDGSLIVSSSYDGLCRIWDAS
TGHCMKTIIDDENPPVSFVKFSPNGKFILVGTLDNSLRLWNFSTGKVLKTYTDHVNSKYC
ISSTFSITNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDTVISVSCNPTQNMIASGSL
GNDKTVKVWTQGGD
NT seq 945 nt   +upstreamnt  +downstreamnt
atggcttcccctaccgagacttcagaatctttcaaaccctacgagcttaaattcactctc
tccggccacaaacgcgctatctccagcgtcaaattctccgacgatggcaaaatcctagcc
acctcctccgccgataaaactgcccgaacatgggatgtctccgacggatcccttcttcac
gaattcctaggtcacgaacagggtatctccgatgttgccttctcctccgacggccgtcac
ctagttactgcctccgatgacaaaactgtacgattatgggacgtttccaccggttcccat
atcaaaacccttacaggtcacacaaattatgttttttgtgttaacttcaatccccaagct
aatatgttggtttctgggtcgttcgatgagacggttaggttatgggatgtgaagactggg
aagtgtctcaaggtgctgccggcgcattccgatcctgtgacggctgtgaattttaatcgg
gatggttcgttgattgtgtcaagcagctatgatgggttgtgcagaatttgggatgcttca
accgggcattgtatgaagaccattattgatgatgaaaacccacctgtgagcttcgtcaag
ttctcgcccaatggcaaatttatactcgttggcactttggataattctctgaggctttgg
aacttctcgacaggaaaagttctgaaaacttacacggaccatgtcaactcaaagtactgc
atttcatcaacattttccataacaaatgggaagtatatcgttagtggttctgaggataat
tgtgtatatttatgggaactccaatcaaggaagatagttcaaaaattggaaggccatact
gatactgtgatttctgtatcatgcaaccccactcagaacatgattgcttctggttctctt
gggaatgacaagactgtgaaggtatggactcaggggggagactaa

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