Solanum tuberosum (potato): 102585520
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Entry
102585520 CDS
T02981
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03030
DNA replication
sot03420
Nucleotide excision repair
sot03430
Mismatch repair
sot03440
Homologous recombination
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102585520
03420 Nucleotide excision repair
102585520
03430 Mismatch repair
102585520
03440 Homologous recombination
102585520
03460 Fanconi anemia pathway
102585520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sot03000
]
102585520
03032 DNA replication proteins [BR:
sot03032
]
102585520
03400 DNA repair and recombination proteins [BR:
sot03400
]
102585520
Transcription factors [BR:
sot03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102585520
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102585520
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102585520
MMR (mismatch excision repair)
102585520
DSBR (double strand breaks repair)
HR (homologous recombination)
102585520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
102585520
NCBI-ProteinID:
XP_006338140
LinkDB
All DBs
Position
Un
AA seq
653 aa
AA seq
DB search
MPVNLTANAISAINAGDVNSKPVVQVLDIKLIGTTQERYRLTLSDSESTQQAMLATQLND
RVKTGRVRKTSVIQLIEYICSTVQNRKIIVVLNMETIIPECEIIGNPKVIVESNLGAQKT
TSNGASGSANLGNNGNLSAQRSAQASFANSKNLSAQNSGNSMQNYPPAIQPAYQPPPNYK
NHGAIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNSRGDGKVFSFDLLDSD
GGEIRVTCFNAVVDRFYDKIEAGKVYMISKGSLKPAQKNFNHLKNEWEIFLETTSTVDLC
PDEDASIPRQQFSFRPICEIESAENNSIIDVIGIVTAVNPSVPILRKNGMETQRRILNLK
DQSGRSIELTLWGDFCNREGQNLQELAEAGFSPVLAVKAAKVSDFTGKSIGTISSTQLFI
NPDSAEAQTLREWFDQGGKDIASQSISRDNMPVGSKIETRKTVFQIKDEGFGRSEKPDWV
TVKATITFIKTDTFCYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFEECDYRYLLQA
QIQDHSGLTWVTTFQESGEEILGCPAKELYMMKYEEADDTRFSEIIRNCLFTQFLFRLKI
KEEFYGDEQRVKITVVKAEKVNHSAESRYLIDLISKFRLSKEAMIIDSYCVHL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaacttgacggctaacgcgatctcggcgatcaacgccggtgacgtgaactca
aagccagtggttcaggtattggacatcaagttaatcggcaccacacaggaacggtaccga
ctcacactctccgattctgagtccactcagcaggctatgctagctactcagctcaatgac
cgagtcaaaactggccgtgttcgtaaaacctccgtcattcagttgattgaatacatctgt
agcactgttcaaaatcgaaaaatcattgttgtccttaacatggaaactattataccagaa
tgtgaaataattgggaacccgaaagtgattgtagaatctaatttaggagctcagaaaact
acatctaatggagcttctgggtctgcaaacttgggtaacaatggtaacttgagtgctcaa
agatctgcccaagcaagctttgctaacagtaaaaatttgagtgcccaaaattcaggtaat
agcatgcagaactatccacctgcaattcaacctgcatatcaacctcctccaaattacaaa
aaccatggggcaatcatgaagaatgaagcacccgcccgcattattccaattgcagcattg
aatccctatcagggtcggtgggctattaaggctagagtgactgcaaagggggatttacgt
cgctataataattctagaggagatggcaaggtcttctcctttgatctccttgactctgat
gggggtgaaatacgtgtgacttgttttaatgctgttgttgatcgcttttatgacaaaatt
gaagctggaaaagtgtacatgatatctaaaggcagcttgaaacctgctcagaagaacttc
aaccatctgaagaatgaatgggaaatatttttggagacaacttcaactgtagatctctgt
ccagatgaagatgcctctataccaagacagcagttctcatttagacctatttgtgaaatt
gaaagtgcagaaaacaattcaatcatagatgtgattggaattgtgacagcagtcaatcct
tctgttcctattctgagaaagaatggaatggaaactcaaagaagaatcttgaatctaaag
gatcagtctggccgaagtattgagctgaccttatggggagatttctgtaatagggaaggt
caaaacctgcaagaactggcagaagctgggttttcccctgttttagctgttaaagctgca
aaagttagtgacttcacagggaaatccattggaaccatttcttccacgcaactgttcata
aatccagattccgcagaggctcagactctaagagagtggtttgatcagggggggaaagac
attgcttctcaatctatatctagggacaacatgcctgtaggatcaaaaattgagacacgt
aagactgtctttcagatcaaagatgaagggtttggtaggtcagaaaaaccagactgggtt
acagttaaggcaaccataacattcatcaaaactgacactttctgttatactgcttgccct
ttgatgattggagacagacaatgtaataagaaagttaccagatcaggaaactccagatgg
caatgtgataggtgtaatcaagagtttgaggaatgtgattacagataccttcttcaagct
caaattcaagatcatagtgggttgacatgggtgacaactttccaggaatctggcgaagag
attttaggctgtcctgcgaaggagctgtacatgatgaaatatgaagaggctgatgatacc
agattttctgaaattattagaaactgtctcttcacacaatttctgttccggctaaaaatc
aaagaggaattttatggtgatgagcagagggtgaaaattacagttgtcaaggcagagaaa
gtgaaccattctgcagaaagcagatatctcattgatttaatttcaaaattccgtctttca
aaggaagccatgataatagattcttattgtgtccatctttag
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