KEGG   Solanum tuberosum (potato): 102585613
Entry
102585613         CDS       T02981                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K20241  WD repeat-containing protein 44
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sot04131]
    102585613
Membrane trafficking [BR:sot04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    102585613
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_HPS5 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 VPS11_N Beta-prop_WDR75_2nd Cep192_D4
Other DBs
NCBI-GeneID: 102585613
NCBI-ProteinID: XP_015165763
LinkDB
Position
Un
AA seq 657 aa
MMKSMQVEEVFFDSADSLVLEEEELGFVKKNLGYDVWLMEPESVTSRREKFLNEMGFVGF
DCLPSAASDESDSMGLNRIAESSEAVCSSASEEEFMCNERESSGNANSLTDELDQTWFDD
DCTSSRSTDGEHTCFDATSDHTHRKDSNLKNQKMKKWWKQFSLKMSKSQSTDAFKTSNEM
FTEKQKVTPMKVQLNKKKINEFSAIYCGQEVSAHNGLIWTMKFSPDGKYLASAGEDGVVR
IWLVTVDSSCESPNFSLSSHRVKGKHGHRKNKSCYTPVIVPKKAFKIDESPLHEFHGHTA
GILDLAWSSSNCVLSSSKDKTVRLWKVGLDGCQGVFHHKNYVTCIQFNPVDENIFISGSI
DGKVRIWGVPGKRVLEWTDTHDIVTAVAYQPNGQGFIVGCISGTCCFYELNESVLSLNTQ
VHLHSRKKSSGSRITGIQFFENDSQRVMITSEDSKIHILDGVEIVHKYKGLSKSGCHTSA
TISSTGKHIVSVGEDSRVYLWDNADDINIQASKQTKSIRSCEHFLSEGISVAIPWSGQAT
TVVDSENFGSSNFDPLRGEHQKASCKTLDSRRFSVGNWFSMDVSFRGSVTWPEEMLLPHE
NDEHLCSSKVDHLHQQHQHNKNLNYRALSPAWGLVIVTAGWDGKIRTFHNYGLPVRV
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgatgaaatcaatgcaagtagaagaagttttctttgattcagctgattctttggtgttg
gaggaagaggaactaggttttgtgaaaaagaatttggggtatgatgtatggttgatggag
ccagaaagtgtgacgagtcgaagagagaagtttttgaatgaaatgggatttgttggattt
gactgcctacctagtgcagccagtgatgaatctgattcaatggggttgaacaggattgcg
gagagtagtgaagcagtttgtagttctgcttcggaggaagagtttatgtgtaatgaaagg
gaatctagtggtaatgcgaattcattgactgatgaattagatcagacttggtttgatgat
gattgcacttcttcgcgttctacggatggagaacatacttgttttgatgctacttccgac
cacacacaccgtaaggatagtaacttgaaaaaccagaaaatgaagaagtggtggaaacaa
tttagcctaaagatgagtaaaagtcaatctactgatgcatttaagacttctaatgagatg
ttcactgaaaagcagaaagtaactccaatgaaagtgcaactgaacaagaagaaaattaat
gagtttagtgcgatttattgtggacaagaagtcagtgctcataatggccttatatggaca
atgaagtttagccctgatgggaaatatttggctagtgctggtgaagatggggttgttcgg
atttggctagtcacagttgattcatcatgtgaatcacctaacttcagtttaagcagtcat
cgcgtcaaaggcaagcatggacatagaaagaacaagtcttgttatacccctgttattgtt
cctaagaaggcattcaaaatcgatgagtcgccgctgcatgaatttcatggccatactgct
ggcatattggaccttgcctggtcctcatctaactgtgttctatcttcatccaaagataaa
accgttcgtctatggaaagttggtttggatggatgccaaggagtttttcatcacaaaaat
tatgtgacatgcatccagttcaatcctgttgatgagaacatcttcatcagtggctccata
gatggaaaagttcgtatttggggagttccaggaaagcgagttctggaatggaccgatacg
catgacattgtgactgccgtagcttatcagccaaatggccaaggatttatagttggttgt
atctctggtacttgctgcttctatgaattgaacgaaagcgtactttccttgaacacacaa
gtacatcttcatagtaggaagaaatcctctggcagcagaatcaccggcattcagtttttc
gaaaatgactcccaaagagttatgataacatcagaggattccaaaatccatattcttgat
ggggtcgagattgtgcataaatataaaggtctatcgaaatcaggatgccatacatctgct
acaattagctcaactggaaaacacatagtatcagtcggggaggactcacgtgtctatctc
tgggacaatgctgatgatataaacatccaagcatccaaacaaacaaaatctatacgatcc
tgtgagcatttcctctcggaaggcatttctgttgcaataccgtggtcagggcaggcaaca
acagtagtggattcagaaaattttggcagttccaactttgatccactaaggggtgaacat
caaaaggcttcttgtaagactttggattcaagacgattttctgttggaaattggttttct
atggatgtgtcatttaggggctccgtgacatggccagaagaaatgcttcttccacacgaa
aatgatgaacacctttgtagttctaaggttgatcatcttcatcaacaacatcaacataac
aagaaccttaactacagagcgttgtccccggcatggggccttgtcattgtgacagctggt
tgggatggaaagattcggacattccataactatggattgcctgtccgagtttaa

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