Solanum tuberosum (potato): 102585640
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Entry
102585640 CDS
T02981
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Module
sot_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102585640
Enzymes [BR:
sot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102585640
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
102585640
NCBI-ProteinID:
XP_006357141
UniProt:
M1A9G4
LinkDB
All DBs
Position
Un
AA seq
391 aa
AA seq
DB search
MSPLAIFLLFLIHSSLAANTNIYNVQNYGAKSDGKTDSSKAFLSAWAAACASNTPATINV
PSGKYLIHNAYFNGQTCKSKAITIHIDGTLLAPSDYNVIGNDENWIKFEKVNGVSIYGGT
FDGQGAALWDCKNSNKNCPDGTTALAFYNSNNIIMSGVTVQNSQKFQILVDGCHNVKLQG
MKVLAQGNSPNTDGIHVKLSSGVSIMKSQIGTGDDCISIGPGTSNLWIEGIACGPGHGIS
IGSLGWKQQELGVQNVTVKTVTFSGTTNGVRVKTWARPSSGFVRNILFQHIVMVNVKNPI
LIDQNYCPNHESCPHQGSGIKISDVTYQDIRGTSATKIAVKLDCSITNPCSGIILEDLNL
SYQNQQTEASCVNARGRVSGLQKPNNCLLKN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttagcaattttcttgctcttcttaatccactcatcgttagcagcaaatacc
aatatttacaatgtccaaaattatggagcaaaatccgatggaaaaactgattcatcaaaa
gcctttttgagtgcatgggcagcagcatgtgcttctaatacccccgccactattaatgtg
ccaagtggaaaatacttgattcacaatgcatatttcaatggacaaacatgcaagagcaaa
gctattactatacacattgatgggactctcttagctccctctgattataatgtgattggc
aatgatgaaaattggataaaatttgaaaaagtcaatggcgtttccatctatggtggaacc
tttgatggtcaaggtgctgctctttgggattgcaagaactccaacaagaattgccctgat
gggactacggcattggctttttataactcaaacaacattataatgagtggagtaaccgtt
caaaatagtcaaaagtttcaaattttagtagacggatgtcataatgtgaagctacaagga
atgaaggtattagctcaaggaaatagtcccaacactgatggaattcatgtaaaattatca
tcaggagttagtattatgaaatcacaaattggtactggtgatgattgtatctctattggt
cctggaacttctaacttatggattgaaggcattgcatgtggccctggccatggaataagc
attggaagcttaggctggaaacaacaagagttaggagtccaaaatgtgacagtaaaaact
gtgactttcagtggaacaacaaatggtgtgagagtcaaaacttgggcaaggcctagcagt
ggctttgttagaaacattctgtttcaacatattgttatggttaatgttaaaaacccaatc
ctcatagatcaaaattactgtcctaatcatgaaagttgtcctcatcagggctcgggtata
aagataagtgatgtaacatatcaagacatacgtggaacatcggctacaaagattgcagtg
aaacttgattgtagcataactaatccatgtagcggcataatacttgaagatctgaatctt
agttatcaaaatcagcagactgaagcttcatgtgttaatgccagaggaagagtttctggt
ttacaaaaacctaacaattgcctattgaaaaattag
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