Solanum tuberosum (potato): 102585973
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Entry
102585973 CDS
T02981
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102585973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102585973
Membrane trafficking [BR:
sot04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102585973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
ANAPC4_WD40
Beta-prop_EML_2
TPR_VPS8_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_THOC3
WD40_Prp19
zf-RING_Vps41
WD40_Gbeta
Beta-prop_Aladin
zf-RING_2
zf_RING_Vps8
zf-C3HC4_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
102585973
NCBI-ProteinID:
XP_006356912
LinkDB
All DBs
Position
Un
AA seq
1910 aa
AA seq
DB search
MELDLDSFLDSHADDDDDDNHLLHHRTVDEILLNHSSSSSSSPSPPSSPSSLHRRNDLDC
RNRSAESSFQSLKPPLELHQTESRAESISRKQSSEFSSPPAGQSVLPPFFSGVIRSNSKP
GDALAAAFAASRSIPAPRAAAIKSRKASSGVLQRALETDELAPIDPPARTDANISDKNLD
TFGRTVFLQEIGSETIGLEGNIKDQFQAGQVQLSDTDNGSREVSTVDAGMDNMNVSDAGD
VSVVDDFSVKSNLNEALSYTGTQVESPSRTESDSVFHDSSGLDEIEDRQVQPLFGGEDNV
VSADSSEEAGTKEILSSPVYETLSDEDLTKNDGAKLEHENVIPQSKEGEVSSNGDETNSL
NDAASIIDELVLQQESMRDSTNPQKNYHSALKPLELAEEAEKKQAFTAMHLEEGASAQPM
RLDGVHRSSNVLGYFDVDDNNTITQTLLSQAFRREHGSSQVLAVHLKYIAVGMSKGSILV
MPSRYSSSHHADNMDAKMLIFGLPGDKSHAPVTCLSFNQQGDMLFAGYGDGHYTVWDVQR
ASVLKVVTEHKAPVVHLLYLGQDSQVTRQFIVLSGDTKGVVNLDRFTVFPLFNRISLSKS
QELLNESNSTTLCAVSLLSGESYGSAMVAASQEGGSPSLIEEGVVILGTHQYALVAKLSP
TFKVYAKIPRPDGAREGSMPYAAWKSESISTETSEKVSLLAIAWDRRVQVAKLVKSELKV
CWRWTTDSSAVGLAWLDEQILVILTATGQLCLFSKDGNLIHQRSFSMDGSCGEDLMSYHA
YFSNVFGNPEKAHHNCLGVRGATLYILRPSQLVVSCLLSWKERIEVLHKAGDWTSALNMA
MSLYDGQAHAVIDLPKNLDDVQKTLMPYLVQLLLSYVDEVFSYIAVTSGNQHGQPGQSNE
LKYDADFVNPDIKEQYTLVGGVSVEFCLHIKRLDVLFDEIFPKYVAVNHKDTFLELLEPY
ILKDMLGSLPPEIMQALVEHYSTKGWLQRVEQCVLHMDMLSLDFNQVVRLCREHRLHGAL
IYLFNKGLDDFRTPLEELFLILRDSKRESATALGYKMLVYLKYCFQGFAFPPGRGAFPST
RVPSLKRELVQFLLEEASSPNSSTAMCLPYSGPNPNLLSLLELDTEATLDVLRYAFVEGE
NESYSPASDPANSKMETAEVVFSTIEGINLVQKVVDVLAVILNLSYFQTGGTFNNKDEIC
TDIWPTRKDTEYILDFISFLIASEKAKVSKDTLRQIFECLTLGNETYPNVSGQIVETFNR
KQKQLTALLEVLPEEDWDADYLLNLCERAQLHQVCGLIHAITHQYLSALDSYMKAVDEPI
LAFVYVDDMLRQLRGKESDDFRSAIISRIPDLLKLNREGTFFLIVNHFGEESDYILSQLQ
SNPESLFLYLKTLIEVHSTGTLNFFSLRKNNASNFSSGRNKKHMSSEVYLEALSDLPKLL
QNYPIHITDEMTELYIELLCRYERKSVLRFLETSESYRVERCLHLCQEYGVIDAAAFLLE
RVGDIGSALLLVISSLNDKFILLDSAVESEHCGTAPGHFKAILSKKEVTDIIEILRTCIG
LCQRNSPRLDPNEAESLWFQLLDSFCEPLMDSHDHIIRYKEEECVQEGEWACKIQWKVSK
SHRNAHILRKLLSVFIKEIVEGMIGYVSLPRIILKLLSDNETQEFGDFKPTILGMLGTYD
FERRILDTAKSLIEDDTYSSLSLLKRGASHGFAPRNLLCCICNCPLTKDFSASSIQIFTC
GHATHQQCEPQESEASIRGNSTGCPICMPRKNSEKLRSKSMLVQNVLVKSISKSHQTNGR
TGLFPHENDGFDNSYGLQSVSRFDLLLNLQKTHQSMQIENIPQLRLAPPAVYHEKVKKRN
VPSAGESSNGLAKPEKPSRSKHLRDVKLKGSSLRFPLKTNIFGKEKNIKL
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgacctggattcatttttagattcacacgctgacgatgatgatgatgataat
cacttactacatcatcgcactgttgatgaaattctcctcaaccactcgtcctcttcttct
tcttcgccttctcctccttcttctccatcttctttgcatagacgcaatgatctagattgt
cgcaatcgctcggcagaatcatcttttcaatccctaaaaccgccattagagttgcatcag
acagagtcaagagcagagtcaattagtcgtaaacaatcgagtgaattttcttcaccacca
gcaggccagagtgtgttgccaccatttttcagtggggtcatcagatcaaattcaaaacct
ggagatgccttggctgcggctttcgctgcatcccgctccattcccgcacctcgtgcagca
gccatcaaatccagaaaagcaagctccggagtgctgcaaagggccttggaaactgatgaa
ttggctcctatagatcctccagctcgcactgatgccaacatttctgacaaaaatcttgat
acttttgggcgcacagtgtttttacaagagattggttctgagactattggtttggaaggt
aacataaaggatcagtttcaagctggtcaagttcaactaagtgatacagacaatggtagt
agggaggtatctacagtggatgcaggtatggacaatatgaatgtttctgatgcaggtgat
gtttctgtggtggatgatttttcagttaaaagtaatttgaatgaagctctaagttatact
ggaactcaagtggaatctcctagtagaactgaatcagactcggtttttcatgatagctct
gggttggatgagattgaagatagacaagttcaacctttatttggaggtgaagataatgtt
gtaagtgcggatagcagcgaagaagctggtactaaggagatactctcttctccagtctat
gagactctttctgatgaagatttgactaagaatgatggtgcaaagcttgagcatgaaaat
gtaattcctcaatccaaagaaggagaggtcagttccaatggagatgaaaccaattcttta
aatgatgctgcaagtatcattgatgagttagttttacagcaggaaagtatgagggatagt
acaaatcctcaaaagaattaccattctgccttgaagcccctagaattggctgaggaagct
gaaaagaagcaggccttcacggctatgcatttagaagagggtgcttctgctcaaccaatg
aggcttgatggagttcataggagttctaatgtcctgggttactttgatgtagatgacaac
aataccatcacccaaaccctattatctcaagcttttaggcgtgagcatggatcttcacag
gtcctggctgttcacctcaaatacattgctgtgggaatgtccaaaggatcaattcttgtg
atgccaagcagatactcctcctcacatcatgctgataacatggatgctaagatgttgata
tttggattaccgggagataaatctcatgcccctgtaacttgcttgagctttaatcagcaa
ggggacatgctctttgccggatatggtgatgggcattatactgtatgggacgtacaaagg
gcctctgtgcttaaagttgtcactgaacataaagctccagttgttcaccttttatattta
gggcaagattctcaagttactcgacagtttattgtgctcagcggtgatactaaaggtgta
gttaacttagaccggtttacagtgtttcccttgttcaatagaatctccctttcgaagtcg
caggaactgctaaatgaaagcaacagcactacattatgtgctgtgtcactactatctggt
gaaagttatggaagtgctatggtggcggcaagtcaagagggaggcagcccttctttgatt
gaggaaggtgtggtcatacttggcacacaccaatatgctctagtggcaaaattaagcccc
acatttaaagtttatgctaaaattccacgtcctgatggtgctagggagggttcaatgccc
tatgctgcttggaaatcagaaagtatttccactgaaacatcagaaaaagtttcactgctt
gcaattgcttgggatcgaagagttcaggttgcaaagctggtgaaatctgagctaaaagtc
tgttggagatggactacggatagctcagcagttgggctggcatggttggatgaacagatt
ttggtaattctcacagcaactggacagctttgtttgttttcaaaagatgggaatttgatc
caccagagaagtttttctatggatggatcttgtggagaggatctcatgtcataccatgcc
tacttcagcaatgtctttggaaatcctgagaaagctcatcacaattgtttaggtgtcagg
ggggcaactttgtacattcttcggccatcccagcttgttgtttcatgccttctttcctgg
aaggaacgaatagaagttttacataaagcaggtgactggacgagtgcactgaacatggca
atgtctctttatgatggtcaagcacatgctgttattgaccttccaaagaatttggatgat
gtgcagaagacccttatgccatatcttgtacaactgctgttgtcatatgtagatgaggtg
ttctcctacatagcagtgacatctggcaaccaacatgggcagccaggccaatcaaatgaa
ttgaagtatgatgctgactttgtgaatcctgatattaaggagcagtacactctggttggt
ggtgtttccgttgaattctgtcttcatatcaagagacttgatgttctctttgatgaaatt
tttccaaagtatgttgctgtgaatcacaaggatacatttttggagcttctggagccatat
atattgaaagacatgctaggatctttaccacctgagataatgcaagcactagtcgagcac
tatagcactaaaggttggttacagcgtgttgaacagtgtgttctccacatggacatgttg
tccctggatttcaatcaggttgttcgcctatgcagggagcatagactgcatggtgcattg
atctatttgttcaacaaaggccttgatgattttaggactccattggaagagctcttttta
attttgcgggatagcaaaagagaaagtgctactgctcttgggtacaagatgcttgtttac
ctcaagtactgcttccaaggttttgcttttcctccagggcgtggagcattcccttccaca
cgtgtgccgtctcttaaaagagagcttgtgcaatttttgttggaggaagcgagttctcca
aattcttcgacagcaatgtgcttaccttacagtggaccgaacccaaaccttctctctctg
ttagagctcgacacagaggccaccttggatgttttgcgatatgcatttgtagaaggtgaa
aatgaaagttacagtcctgcatcggatccagccaattcaaaaatggaaacagctgaagta
gtcttttcaactattgaaggcataaacttagttcagaaagtagtagatgtccttgcggtc
attcttaatctgagttatttccaaactggtggtacctttaacaataaagatgaaatatgt
actgacatttggcctacaaggaaagataccgaatacatattagattttatttccttttta
attgcctctgaaaaagctaaggtttcaaaagatacccttcgtcaaatttttgagtgcctg
acactgggtaacgaaacttaccctaacgtttctgggcagatagttgaaaccttcaatagg
aaacagaagcaactgactgcacttttagaagttttgccagaggaagactgggatgctgat
tacttactgaatttatgtgagagggctcagctgcatcaggtctgcggcttaattcatgcc
atcacacatcagtatctttctgctttagacagttatatgaaagctgttgatgagcctatt
cttgctttcgtatatgttgatgacatgttgcggcaactgcgaggcaaagaatctgatgat
ttcagatcagcaatcatttctcgaatcccagatctactcaagttgaacagggaaggaact
ttttttctgattgtcaatcattttggagaggagagcgattacattttgtctcagctgcag
tctaatccagaaagtcttttcctttatctgaagactctcattgaagttcattcaacaggc
accctaaacttcttttctttaagaaaaaataatgcttcaaacttctccagtggaagaaat
aagaaacatatgtcctctgaagtctacctggaagccttgtctgacttacctaagctcctg
cagaactatccaattcacataactgatgaaatgacggagctttatattgagctattatgt
aggtacgagcgtaagtcagttctcagattcttggagacttccgaaagctacagggtggag
cgctgcttgcatttatgccaggagtatggagttatagatgcagctgctttcttgttagaa
agggttggtgacatcggaagtgcccttttgcttgttatatcttcgctcaatgataaattc
atcctgcttgattctgctgttgaaagtgaacattgtggtacggctccggggcatttcaaa
gctattttgagcaagaaagaggtcactgacataatagagattttacgcacttgtattgga
ctgtgccagaggaacagccctcgattggaccccaatgaagcagagagtctgtggtttcaa
ttgcttgattctttttgtgagcctttgatggattcacatgatcatataataagatataaa
gaagaagaatgtgtgcaagaaggcgagtgggcttgcaaaattcagtggaaggtgtcaaaa
tctcatagaaatgctcacatcctcaggaaattgctctctgtgtttatcaaagagattgtt
gaaggaatgattggatatgtaagcctcccgaggatcatattaaagcttctttctgataat
gagacacaggaatttggtgatttcaaacctactatactggggatgcttggaacatatgac
tttgagaggcggattttggatactgctaaatcattgattgaagatgatacatattcctcc
ttgagcttactgaaacgaggagcttctcatggatttgcacctcggaacctcctatgttgc
atttgtaactgtcccctcacaaaagatttctcagcttctagcattcaaatttttacttgt
ggtcatgcaacacatcagcaatgtgaacctcaggaaagtgaagcatcaatcaggggtaac
tcaacaggatgtcctatttgtatgccaagaaagaattcggagaagttgagaagtaaatct
atgcttgtgcagaatgtattggtgaagtctatatcaaaatcccatcaaacaaatggtagg
actggtctatttccacacgagaatgatggtttcgacaactcctacggacttcagtctgtt
tcaaggtttgacctcctccttaatcttcaaaaaacccaccagtctatgcaaatagagaat
atccctcaattgaggcttgcaccacctgctgtataccatgaaaaggttaagaaaagaaat
gttccctcggctggagaaagcagcaatggtctggcaaaaccggagaaaccaagtaggagt
aagcatctcagagacgttaaactgaaggggtcgtctttaaggttccccctaaaaacaaat
atatttggtaaagagaagaacattaagctgtga
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integrated database retrieval system
