Solanum tuberosum (potato): 102586108
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Entry
102586108 CDS
T02981
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sot03000
]
102586108
04121 Ubiquitin system [BR:
sot04121
]
102586108
Transcription factors [BR:
sot03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102586108
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
102586108
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
RRM_R3HCC1L
Motif
Other DBs
NCBI-GeneID:
102586108
NCBI-ProteinID:
XP_006341494
UniProt:
M1B473
LinkDB
All DBs
Position
Un
AA seq
1125 aa
AA seq
DB search
MSFPAQNNRRNNNSNRPRNINNNPVVQSGGARREWVARGSTPTNTVPFSTAPVTPVSTTT
VVTPGFGGNGRDNDNVPVVPVNRFQNQNQTYVEPKFNRGTYGNQRERGRGSYNHQENRME
RPVREVSGRINQEQVKDPNLPQLVQEIEEKLLKGNIECMICYDMVRRSAPMWSCSSCYSI
FHLHCTKKWARAPTSVDTSAEKNQRFNWRCPGCQSVQLTSSRDIRYLCFCGKRQDPPSDL
YLTPHSCGEPCGKKLEKELPGNGLSEEDLCPHVCVLQCHPGPCPPCKAFAPARSCPCGKE
VITTRCSDRKSVLTCGQQCGKLLDCGRHRCEQTCHVGPCGHCQIVVDAYCFCKKKTESVL
CGDMGVKGSIKMEDGVFSCNSVCGKKLSCGNHICRELCHPGPCGDCALLPSKVKACCCGK
TSLEEERHSCLDPIPTCSKVCGKRLRCGVHRCEAVCHSGDCAPCLVPVNQRCRCGSTSRT
VECYRTQAEDEQFTCDRPCGQKKNCGRHRCSERCCPLSNPKNSITGGWNPHFCSMPCEKK
LRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPLPSCQLPCSVSQPC
GHPPTHSCHFGDCLPCAVPVAKECVGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACAR
TCHPSPCDVSAGPSNGSRDSCGQTCGAPRRDCRHSCTALCHPSSSCPDVRCEFPVTITCS
CGRITANVPCDAGGQIVDSVFEASIIHKLPSSLQPIELNGKKVPLGQRKLTCDDECAKME
KKKVLSDAFGITPPNLEALHFGENAAVSEVLGELLRRDAKWVLSIEERCKFLVLGRSRGG
VNALKVHVFCPMSKEKRDAIRLIAARWKLSVNAAGWEPKRFIAVHVTPKSKAPTRILGPK
GCTVNNIAQPAVFDSLVDMDPRLVVALFDLPRDADISALVLRFGGECELVWLNDKNALAV
FNDPARAATAMRRLDQGSAYCGAAVVHQSGVASAVASATNVWGVSGGAKDGGGVAALKGN
PWKKAVVQEPHLRESLWDADEWSKNPTDLAAPSAWRANEAPPTASSNRWSVLEPEITSSL
PRVSITIQKPVTETEVGGSVLPPKPQDVGIDDMADVVDDWDKAYD
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcctgcacaaaacaatagaaggaataacaacagtaatcgacctagaaacatt
aataataatcctgttgttcaaagtggtggtgctcgtcgtgagtgggtagctaggggatcc
actccaaccaacactgttccattttcaactgcccctgttaccccggtatcaacaaccact
gttgtgacccctgggtttggtgggaatggaagagacaatgataatgtgccagttgtgccg
gttaatcgatttcaaaatcaaaatcagacctatgtggaacccaaattcaatagggggaca
tatgggaatcagagggaaaggggcagggggagctataatcatcaggagaacaggatggag
aggccggtcagggaggtcagtgggaggattaatcaagagcaggtgaaggatcctaatttg
cctcaacttgtgcaagaaatagaggagaagctgttgaagggtaacattgagtgcatgata
tgctatgatatggtgaggaggtctgcgcccatgtggtcatgttcgagctgctactcgatt
ttccatcttcattgtaccaagaaatgggcaagagctcccacttctgttgacacatctgca
gagaagaatcaaaggtttaattggcgttgcccaggttgtcaatcagtccagctcacttca
tccagggacatacggtatctttgcttttgtgggaagaggcaagaccccccttcagattta
tacttgactccacattcatgtggagagccttgtggcaagaaacttgagaaggagcttcca
gggaatggtctgagtgaagaggatctttgccctcatgtttgtgtcctacaatgccatcct
ggtccttgtccaccttgtaaggcatttgctccagctagaagttgcccctgcgggaaggaa
gtaattaccactcgctgctctgatcggaagtccgttcttacatgtggacagcagtgtggt
aagcttcttgactgtgggcgtcataggtgtgaacaaacttgccatgttggtccttgtggc
cattgtcaaattgttgtggatgcctattgcttttgtaagaagaaaacagagtctgttctt
tgtggagatatgggtgtgaaaggatctatcaagatggaggatggcgtcttttcatgcaat
tcagtttgtggaaagaagcttagttgtggaaaccacatctgccgtgagctctgccatcca
gggccatgtggggactgtgctttgttgcctagcaaggtcaaggcatgctgttgcggtaaa
accagcttggaagaagaaaggcacagttgtttggatccaattccaacctgttccaaggtc
tgcggaaagcgcctccgttgtggggtacatcgctgtgaagctgtgtgccattctggtgac
tgtgcaccatgtcttgttcctgtgaatcaacgctgccgctgtgggtcaacttctcgaaca
gtagagtgttacagaacgcaggcagaagatgagcagttcacttgtgatagaccttgtggg
caaaagaagaactgtggaaggcatcgatgtagtgagcgatgttgccctctttctaatcca
aaaaactccatcacgggtggttggaatcctcatttttgttcaatgccgtgtgagaagaag
cttagatgtgggcagcattcttgtgagtcactttgtcacagtggtcactgccctccctgc
cttgagacaattttcaccgatttgacttgtgcttgtgggagaacatcaatccctcctccg
ctaccttgtggcacacctcttccttcgtgtcagttaccatgctcggtttctcagccttgt
ggccacccacctactcacagctgccattttggggactgcctgccatgtgctgttcctgta
gcaaaagagtgcgttggtggacatgtaattttgagaaatataccttgcggatcaaaggac
atcaggtgtaacaagctttgtgggaagaccaggcagtgtggcttgcacgcatgtgctaga
acttgtcatccttcaccatgtgatgtttctgccggacccagcaacggctccagagactct
tgtgggcagacgtgtggtgctcctagaagagattgcaggcactcatgtactgctctttgt
cacccctcttcttcatgtcctgatgttagatgtgagtttcctgttactattacttgttct
tgtggccggatcacagcaaatgttccttgtgatgctggaggtcagatcgttgactctgtt
ttcgaagcttctataatccacaagctgccttcatctcttcaacctattgaattaaatggg
aagaaggttcctcttggtcagaggaaacttacttgtgatgatgagtgtgcaaagatggag
aaaaaaaaggttctttccgatgcttttggtataactccccctaatttggaggccctccat
tttggtgagaatgcagctgtctctgaagtgctgggggagcttcttaggcgggatgctaag
tgggtgttgtctatagaggaaaggtgcaagtttttggttcttggcaggagcagagggggg
gtgaacgcgctcaaagttcatgtgttttgcccaatgtcgaaagaaaagcgggatgcaatt
agactgatagctgcaaggtggaagctttcagtaaatgcagctggttgggaacccaagaga
ttcatcgctgtacatgttacacccaagtccaaagctccaacgcgtatacttggtcccaaa
ggttgtactgtcaataacattgctcagcctgctgtttttgattctctggtggatatggat
ccaaggcttgttgtggctttgtttgacttgccaagagatgcagacattagtgcgttagtt
ctcaggtttggtggtgagtgtgagcttgtctggttgaatgacaagaatgccttggctgtg
ttcaatgatcctgcccgagcagcaacagctatgagaaggctagaccaggggtcggcctat
tgtggtgctgctgtagttcatcagagtggtgttgcatcagcagtggcatccgctactaat
gtttggggagtctctggaggagcgaaggacgggggaggagttgcagctcttaagggtaat
ccatggaagaaggctgtagtccaggagcctcatttgagggagagtctatgggatgccgat
gaatggtccaagaatcccactgatttagcagccccttctgcctggagggcgaatgaagct
ccacctactgcctcgtctaataggtggagtgtcttagagcctgaaattacttccagcttg
cccagggtgtctattacgatccagaaacctgttactgagacagaagtggggggttcagtt
ttaccccccaaacctcaagatgtggggattgacgatatggcagatgtagtggacgattgg
gacaaggcttacgattga
DBGET
integrated database retrieval system
