KEGG   Solanum tuberosum (potato): 102586109
Entry
102586109         CDS       T02981                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102586109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102586109
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102586109
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 Zn_ribbon_RanBP MMR_HSR1 GTP_EFTU_D4 Vps36-NZF-N TAPR1-like PBP1_TM
Other DBs
NCBI-GeneID: 102586109
NCBI-ProteinID: XP_006341583
LinkDB
Position
Un
AA seq 733 aa
MPRKVNYGVKYEEDFDDYEDYGYDYDDGYDCAEENGVPPETRSKQESVKSGVWHCPICTF
DNEDTMNVCDICGVLRNPLVKKCVSSKESADGSRAVGGICKDSGASVMAESLFPSLLLQK
AKNVINFEAQNYSFKTEDCFNFYKPGNICGQFHDLHRAFCSQSHCKIDIVPFKFDSPSPD
DLVLSGIAPSKLRPKAADTDKIIQLDIPSNNKELSTEVKKELAAEGHPSSSTSLAKVKHY
DLKDSGSALKTRGNNGLTSNLNDISISSEPHSVDTGKSDSAASSSKNKPQKIVQLPQTED
NFNQLNLAIVGHVDSGKSTLSGRLLHLLGRISHKEMHKYEKEAKQQGKGSFAYAWALDES
AEERERGITMTVGVAYFNTKCYRVVLLDSPGHRDFVPNMISGATQADAAILVIDASVGAF
EAGIDATGGQTREHAQLIKSFGVDQIIIAVNKMDAVGYSKERFDAIKKQLGTFLRACKFK
DSSVAWIPLSAMENQNLVTGPSESRLLSWFQGPCLLDAIDSLQPPQRDYSKPFLLPICDV
VRAQSQGQVTICGKLERGALQTGNKVLVMPFRDVATVRSLERDSQVYNAAKAGDSVTINL
QGIDANHVMAGGVLCHPEFPVPVANHLELKVLILDNGIPILIGSQLEFLVHHAKEAARVV
RILSLLDPKTGKETKKSPRCLLAKQNAMIEVVLQGMVCIDEHSNCKALGRVSLRSSGRTV
ALGLVTRVIGKQE
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgcctcgtaaggtaaattatggagttaagtacgaggaagattttgatgactatgaagat
tacggttatgactatgatgatgggtatgattgtgcagaggaaaatggtgtgccgccagaa
acaaggtcaaaacaggagtcagttaagtctggggtttggcattgtcccatttgcacattt
gataatgaagataccatgaatgtatgtgatatatgtggagtccttcgtaatccattggtc
aaaaaatgtgtcagcagtaaagaaagtgcagatggttcccgtgcagttggtggcatatgt
aaagattctggagcatctgtaatggccgagtctctatttccatcactgctgcttcagaaa
gcaaaaaatgttataaactttgaagcacagaattactcttttaagaccgaagattgcttt
aacttctacaagcctggaaatatatgtggacagtttcatgatttacacagagctttttgc
tctcaaagccattgcaagattgatatagtacctttcaagtttgactccccatctccagac
gatttagtactgagtggaatagcaccatccaaattacgtcccaaagcagctgatactgac
aagatcatacagttagatatcccatcaaataacaaggaactgagtacagaagttaaaaag
gaattggctgctgaagggcatccaagctcttcaacctcattagcaaaagttaaacactat
gatctgaaggatagtggttctgctttgaaaactaggggaaataatggcctaacaagcaat
ttgaacgatatatctatatcatcagagcctcacagtgtggatacaggaaagagtgacagt
gcagcatcaagctcaaagaataagcctcagaaaattgtacagcttcctcaaacagaagac
aacttcaaccagctaaatcttgcaattgttggccatgtggattctggaaagtcaacactg
tcaggaaggttgttgcacctattggggcggatatcccataaagaaatgcacaaatatgaa
aaagaggctaagcagcaaggaaaagggtcgtttgcttatgcctgggcattggatgagagt
gctgaagaaagagaaaggggaataactatgacagtgggtgttgcctactttaacacaaaa
tgttaccgtgttgttcttcttgattccccaggccacagggactttgtcccaaatatgata
tcaggggctacacaagcagatgcagcaattcttgtaattgatgcttcagtaggtgcattt
gaagcaggtattgatgctactggaggtcagacgagggagcatgcacaacttatcaaaagc
tttggggtggatcagattataattgcagttaacaaaatggatgcagtgggatattccaaa
gaacgatttgatgcaattaagaaacaattaggcacatttctccgtgcttgtaagtttaaa
gattcttcagtagcatggattcccttaagtgccatggaaaaccaaaatttggtgacaggt
ccatcagaatcacggttgttgtcctggtttcaaggtccttgcctattggatgcaatagac
tctctccaacctcctcaaagagactactcgaagccatttttattgcctatatgtgatgtt
gttagagcacagtctcaaggacaagtgacaatatgcggtaagttggagaggggagctctt
caaactggaaataaggttttagttatgccattcagagatgtggcgacagtgcgttcattg
gaacgtgattctcaggtttataacgctgcaaaagctggagacagtgtcactatcaatcta
cagggtattgatgcaaatcacgtgatggcaggaggtgtcttgtgccaccctgaattccct
gttccagttgcaaatcatttggaactgaaggtcctcatcctggacaatggcattccaatt
ttaattggttctcagttggaatttcttgtacaccacgctaaggaggctgcaagagttgtg
aggattttgtcattgcttgatccaaagactggaaaggagaccaaaaaatcacctcgatgt
cttctggcaaagcagaatgctatgattgaggtggttttgcaaggaatggtttgcattgac
gagcattctaactgtaaagctcttggaagggtgtctctccgatcatcaggaagaactgtt
gcccttggtctggtgacccgagttatagggaagcaggagtaa

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