Solanum tuberosum (potato): 102586174
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Entry
102586174 CDS
T02981
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102586174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102586174
Spliceosome [BR:
sot03041
]
Complex A
U1 snRNP components
U1 related factors
102586174
Complex B
102586174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
102586174
NCBI-ProteinID:
XP_006352103
LinkDB
All DBs
Position
Un
AA seq
1003 aa
AA seq
DB search
MANNSHFTGMQPPIPPLAGPPQGAIPSMSLQFQPMLPPQQAQPYVSGSSQHFQPLGHANV
VMPPQPSQIQFPQPMQQVAGRPVVGGHSMSQGPPNPHDFQRNPPMSNNHMPGSGGPSFPL
SSSYNQVNADSSSSQYQTQIHDHRFPSGVQPWMPTSNHNVNSATTMQNTGELAAPLVLPE
ANNRVDSAETTPSDWIEHTSRNGKKYYYNRRTRISSWEKPLELMTEMERADASTDWREFT
SPAGRKYYYNKVTRKSKWKMPDEVKLAREKDTISHASDFGSISSIKTSSPGADGSFVSAQ
GAMTSPIAVSPVANLPAIVASESSSLSGKVSSPTIDAVEMQNSSEPASPAVANSEKIGIA
VTLGNSVTIPVSSETTSAQDAVACGNGVSPENREEVKQDAAITGIGSATPSEEKTVELGP
LVYESKVEAKNAFKTLLESANIGSDCTWDQAMRAIINDRRYGALKSLGERKQAFNEYLSQ
RKKLEAEERRVKQKKAREDFRIMLEDCKELSPSSRWSKAISIFELDERFKAVERAKDRED
LFEDYKEELEKKERARALEEQKRNRVEYLEFLKSCDFIKASSQWRKVQDRLEADERCPRL
EKIDRLEIFQEYIRDLEREEEEQRKLRMEELRKAERKNRDEFRKLMEEHVAVGMLNAKTI
WRDYCIKIKDIAAYLAVSSNTSGSSAKDLFADVVDELDKQYLDDKSRIRDAVRMTENGLT
STWTLDDFKDAIAKDISSPPISDTNLKLVFEELLERAREREEKEAKKRKRLADEFYELLH
ASKEITASSKWEDCKSLFGDRIMGDESLLLEIFDKFVNELKEKAKEKDRKRQEDKARKEK
ERKDREKKKEKHRRDKHRGDKSRKERERSKKDSTDSDKEIKRSGSDRDKRDSDKEIRRSG
SDRDKKDSDKEIKRSGSDRDKKHRKRHRRSSDDDENEKDHSRSSYRRDSDYKKLKQMDQH
SRSLEANSEGQHKKRKRDHRSDSHRDGDYEDHKDWEFGEDEEV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggctaataattctcatttcactggcatgcagcctcctatacctcctctggcgggtcct
cctcagggtgctattccatccatgtcactgcagttccagcctatgcttccaccccagcag
gcacaaccatatgtttctgggtcatctcaacactttcagccacttggacatgcaaatgtt
gtgatgcctcctcaaccttcacaaatccaatttcctcagcctatgcaacaggttgctggt
agacctgtagtaggagggcatagtatgtctcagggaccacctaatccccatgattttcag
cgaaaccctccgatgtcaaataaccacatgcctggttctggtggcccaagttttccgcta
tcttcttcatataatcaggtaaatgcagattcttcaagctcccagtatcagacacagata
cacgatcataggtttccatcaggggtacaaccctggatgccaacaagtaatcataatgtg
aattctgcgacaactatgcaaaatactggagaactagcagctccgttggttcttccggaa
gcaaataacagggttgactctgctgagactactccctcagattggattgagcatacttct
cgaaatgggaaaaaatactattataatagaaggacaagaatctctagctgggagaaacct
ctagagctgatgacagaaatggagagggcagatgcatcaactgactggagagaatttaca
agtcctgcgggaaggaagtattactacaacaaggttactagaaagtcaaaatggaaaatg
cctgatgaagtcaagttggctcgtgaaaaggacactatttcgcacgcctctgattttgga
tccatttctagtattaaaacatcatccccgggtgcagatggttcatttgtctcggcacaa
ggagctatgacaagcccaattgctgtgtcaccagttgctaacttaccagctattgtggct
tcagaatcatcaagtttatctggtaaggtttcttctccgacgattgacgcagtcgaaatg
cagaactcttcagaacctgcttcgccagctgttgctaattcagagaaaattggaatagca
gtaaccttgggaaattctgtcacgataccagttagttctgagactacttcagctcaagat
gcagtagcatgtggcaatggagtttctccagagaatagggaggaagttaagcaagatgct
gcaataactggaataggaagtgctactccatcagaagagaaaacagtcgagctgggacca
ttagtttatgagagcaaagtggaggcaaagaatgcgttcaaaactcttttggaatctgct
aatattgggtctgactgcacgtgggatcaggccatgagagcaataatcaatgaccgaaga
tatggtgctctaaaatcccttggtgagcggaagcaagcttttaatgagtatctgagccaa
aggaaaaaactggaagctgaagagagacgtgttaaacagaaaaaagctcgggaagatttc
aggataatgttagaagattgcaaagagctgtcaccatcctcaagatggagtaaggcaatt
tccatattcgaacttgatgaacgttttaaagctgttgagcgagctaaagaccgtgaggac
ctttttgaagattataaggaggaacttgagaaaaaggagcgtgcaagggcattggaggag
cagaagcgcaatagagtggagtatttagaattcttaaaatcctgtgactttattaaggcc
agtagccagtggcggaaagttcaggaccgcttagaagctgatgaaagatgcccccgcctt
gagaaaattgaccgcttggagattttccaggaatatatacgtgatttagagagggaagag
gaggagcaaaggaaactgcggatggaagaattgaggaaagcagaacgtaaaaatcgtgat
gagttccgaaaactaatggaagaacatgttgctgtgggaatgcttaatgcaaaaactatt
tggcgtgattattgcatcaaaatcaaagatatagctgcatatctagctgtatcatcaaat
acttcagggtcatcagcaaaagacttatttgcagatgttgtggatgagctggataaacag
tatcttgatgacaagtcacgaattagagatgcagttaggatgactgagaatggactgaca
tcaacctggacgcttgatgattttaaggatgcaattgcaaaggatattagctctccacca
atatcagataccaacttaaagcttgtctttgaagagttactggaaagggccagggagaga
gaagaaaaagaagctaaaaagcgtaagcgtctagcagatgagttctatgaacttcttcat
gcatcaaaggagattactgcatcgtcgaaatgggaggactgtaaatccctcttcggagat
agaataatgggtgatgagagcttgctgctggaaatatttgacaaatttgttaatgaacta
aaagaaaaggcaaaagagaaggaccggaagcgtcaagaggataaggcaagaaaagagaag
gaaaggaaagatagagaaaagaagaaggaaaaacatagaagggataaacacagaggggat
aagagcaggaaagagagagaaagaagcaagaaagatagcacagacagtgacaaagaaatc
aaaaggtcaggaagtgacagagataagagagacagtgacaaggagatcagaaggtcagga
agtgacagagataagaaagacagtgacaaggagatcaaaaggtcaggaagtgacagagat
aagaaacatcgcaagcggcatagacgttcctctgatgacgatgaaaacgagaaagatcat
tcaagaagttcttacagacgtgacagtgattataagaaactgaaacagatggaccagcac
agccggagtttggaagctaattcggagggccagcataagaaaagaaaacgagatcatcga
agtgattctcatagggatggtgactatgaggatcacaaagattgggaatttggcgaggat
gaagaagtttag
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