Solanum tuberosum (potato): 102586214
Help
Entry
102586214 CDS
T02981
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sot03036
]
102586214
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sot00535
]
102586214
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102586214
Meiosis-specific proteins
Cohesin complex and associated proteins
102586214
Proteoglycans [BR:
sot00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102586214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
102586214
NCBI-ProteinID:
XP_006361123
LinkDB
All DBs
Position
Un
AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGYKSYREQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQALLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTVGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIFDKELHDARQKLN
EVEEARNKVAENSTKMYESVLEAHEKSKELEKLSKDLTKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLMILEREVQETKNALNDIKPLHEKQVKEEED
ITRGIMDREKRLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSTLMQEKKLQDEI
DQLKKDMRDQDDIIKVRKVEVDKKETFISGYRNAYNQYKVDRDKLHDERKSLWTQETELT
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLECEDKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKKPHVNYPQGSDVIPL
LKKLRFSDSYCRAFEQVFARTVICRNLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLRFMSTIKQNTVSINLKERELEEVRYKLQDIDQKINELVAEQQKNDAGLGHDKS
ELEQLKQDILNAERQKQSILKALQKKEKLLGNILNQIDQLRASIAMKQDEMGTELVDHLT
PEERDSLSRLNPEITTLKEQLIACRANRIETETRKEELEMNLSTNLERRKQELMAMNSSV
DVDMLQAEVESKYQELKDADSLVDHVTKELTRVSRNIDERNKRLKQIKQEKDNLKALEDK
YQNTLQDEARELEQMLSKRNTYLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKMLH
KCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEEDDNDPDDDEPRADAEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYSVSHKNRVSKVTVVSREGALDFIEQDQSH
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcatcattgaaggatataagagttatcgggaacaagtagccact
gaagatttcagtccaaaagttaactgtgttgttggtgcaaatggatctggcaagtctaac
tttttccatgcaatccgttttgtcgtaagcgacctctttcacaatctgcgcagtgaagaa
agacaggctttgcttcatgaaggagcaggtcaccaagtgttatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtacggctgagaaga
acagtcggtctcaagaaggatgagtatttcttggatggaaaacatatcacgaagacagag
gtccagaatttgctggaaagtgctgggttttctcggtctaatccctattatgttgtgcag
cagggaaagatagcatcattgacattaatgaaggattcagaacgacttgatctactgaag
gaaattggagggacacgtgtttatgaggagaggcgtcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaattattcaagttgttcaatacttggacgagagattg
aatgagcttgaacaagagaaggaggaactgaaaaagtatcaacagcttgacaagcagcgt
aaatctctggaatacacaatttttgacaaagaacttcatgatgcacgccagaaattgaac
gaggtagaagaggctcgaaacaaagttgccgagaactctactaagatgtatgagagtgtg
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctgacaaaagaa
attcaaattttaagcaaggagaaagaagcagtagagaaacagcggacagaggctattaga
aagcgagccaagcttgatcttgattacaaagaccttcaagagaagatgtccacaaatatt
aaagctaaagatgatgcacagaaacaactcatgattctggagcgagaagttcaagaaaca
aagaatgcactcaatgatatcaagcctttgcatgagaaacaagtaaaagaggaggaggac
atcactagagggattatggaccgtgaaaagagacttagcattctttatcagaaacaaggc
cgtgccacccaatttgcgagcaaagctgctcgggacaaatggctccaaaaagaaattgat
gaatatgagcgagttttatcttcaaccttaatgcaggagaaaaagcttcaagatgaaatt
gatcaactcaaaaaagacatgagagatcaagatgatataatcaaagttcgtaaagttgaa
gtggacaaaaaagaaaccttcatatctggttatcgaaatgcttataatcagtataaagtg
gatagagacaaactgcatgatgagaggaagtctctgtggacacaggagactgaactgact
actgaaattgaacggctcaaggctgaagttgtgaaggcagagaaaagcctagatcatgca
actcctggtgatataagaaggggtctgaattctgtaaggaggatttgcagagagtatgaa
atctctggagtatttggaccaatttttgagttgcttgaatgtgaggacaagttttttaca
gctgttgaagttactgctggaaacagcttattccatgttgtggttgataatgatgaaaca
tcaactaaaattattagacacctcaatgctcaaaaaggtggacgagttacatttattcca
ttgaacagggttaaaaaaccacatgttaattatccacagggctctgatgtgattccgctt
ctgaagaaattgaggttttctgattcatattgtagggcatttgagcaggtgtttgcaaga
actgtaatttgtcgaaatctggatgttgccaccagggttgctcgtaccgatgggcttgac
tgtatcactctggaaggtgaccaagttagtaaaaaaggtggcatgactggtggattttat
gatcatagacgctcaaaattgaggtttatgagcaccatcaaacagaatacagtgtccatc
aacctgaaggagcgtgaacttgaggaagttagatataaacttcaagatatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctggcctgggtcacgacaagtct
gagttagaacagcttaaacaagacattcttaatgctgaaagacagaaacaatccatctta
aaagctcttcaaaagaaggagaaactgcttggtaatattctgaatcaaatagatcagctc
agagctagtatagctatgaaacaagatgaaatgggaacagaacttgttgatcatttaacg
ccggaagagcgagattctttgtcacgtttgaaccctgaaatcacgactctgaaggagcag
ctgattgcttgcagggcaaatcggatagagactgaaactagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaagcaagagttaatggctatgaattcttctgtc
gacgttgatatgctacaggctgaagttgagagcaagtatcaggaacttaaggatgcggac
tcactagttgatcatgtcactaaagagcttacaagggtttctcgaaatatagatgaacga
aacaagaggctcaagcagatcaaacaggaaaaggataatctgaaggctcttgaagataag
tatcagaatacacttcaagatgaagccagagaactggaacagatgctaagtaaacggaac
acctatcttgccaagcaagaagaatactctaagaaaattcgggaactgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaatgtaaaagaattatataagatgctgcac
aagtgtaacgagcagctgcaacagttcagccatgtaaacaaaaaggcacttgatcaatat
gtaaattttaccgagcaaagagaagaactccaaagaaggcaagctgaactggatgctggg
gatgagaaaatcaaggaacttatatctgttctggatatgaggaaggatgaatcaattgag
cgcacgttcaagggcgtggctaaacatttccgtgaagtattctctcagcttgttcaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggtgaggaagatgacaatgatcct
gatgatgatgagccgcgtgctgatgcagagggaagagttgagaaatatattggtgtgaaa
gtgaaggtgtcgttcactggacaaggagaaacacagtcaatgaaacagttatcagggggc
cagaaaactgtggtagcactggcacttatatttgccatacaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcagtacagaacagctgtgggg
aatatggttcgtgatttggcagacaggggtagcacgcaatttatcacgacgacatttcgc
ccggagcttgtgaaagtggctgataagatatatagtgtgagccacaaaaatagagttagc
aaggtcactgttgtatccagggaaggagccttagattttattgagcaggatcaatcacat
aactga
DBGET
integrated database retrieval system
