Solanum tuberosum (potato): 102586245
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Entry
102586245 CDS
T02981
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102586245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102586245
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102586245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
102586245
NCBI-ProteinID:
XP_006344862
LinkDB
All DBs
Position
Un
AA seq
283 aa
AA seq
DB search
MQSAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLS
PPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLT
SLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDY
ICTTAERFFAVGRVLGNMVGALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSGLPDMLR
DSTFSTCLREDLTTRRWLQQLINNVNGARVGLQAGGFDHMLMN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagcagagcagcttgtgcttgaactcagcaatcccgatcttagagaaaatgct
cttcttgaactctctaagaagagggaattattccaggacttagccccattactatggaac
tcgtttggtactattgctgcgctcttacaggagatagtatccatctaccctgttttatca
ccgccaaacttgactccagcacaatcgaacagagtttgcaatgctttagcacttcttcag
tgtgtagcctctcaccctgacacgagaatgttgtttctcaatgcacatattcctttgtac
ttgtacccttttctgaatacaacaagcaaatcaagaccttttgaatatctgaggcttact
agcttaggagtcattggtgcccttgtgaaggttgatgatactgaagttatcagttttcta
ctatcaactgaaataattcccctgtgcctgcgcacaatggagatgggcagtgaactgtca
aaaacggttgcaactttcattgtgcaaaaaatacttctagatgatgttggtttggattac
atatgtaccacagcagaaagattttttgcagttggtcgagttttggggaatatggtaggt
gcacttgctgaacagccttcatctaggttgctgaagcacataattaggtgctatcttcgc
ttgtcagacaatccaagggcatgtgatgcactaagaagtggtctccctgatatgcttaga
gactccaccttcagtacctgtcttcgtgaggaccttacaactaggaggtggctacaacaa
ttgattaacaatgttaatggtgcccgtgttggtctacaggcaggtggatttgatcatatg
ctgatgaactaa
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