Solanum tuberosum (potato): 102586381
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Entry
102586381 CDS
T02981
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03015
mRNA surveillance pathway
sot04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102586381
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102586381
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sot01009
]
102586381
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102586381
03036 Chromosome and associated proteins [BR:
sot03036
]
102586381
Protein phosphatases and associated proteins [BR:
sot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
102586381
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
102586381
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
102586381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
102586381
NCBI-ProteinID:
XP_006367699
LinkDB
All DBs
Position
Un
AA seq
517 aa
AA seq
DB search
MKGGVGGEVAEAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDTKEQVGSRRELERVDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGAVFLLSTNDKTIKYWKVQEKKVKKISEMNIDPSKAAGNGSVASSSLCSS
PKQCLANGGCGDKAYSSLSNDLSFLPEGIPSLRLPMVTSNETSLLARCRRVYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN
TLAYSSSKGSVRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRYI
LSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVATG
SYSNLFRVFGCAAGSTEATTLEASKNPMRRQVQTPSRPSRSLSSSLTRVVRRGADNASVD
ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggtgttggtggagaagtcgcggaagctccggcgggtccaccaccgccgcta
gagtggaaattttcacaggtttttggtgaacgtacggctggtgaagaagtgcaggaagtt
gatatcatctcagcaattgagtttgataaatctggtgaccatcttgcaactggggatcgt
gggggtagagtggtattgtttgaaaggaccgataccaaggagcaggttggtagtcgacga
gagttagagagagtggactatccagttagtcggcatccagagttccgctacaagacagaa
tttcaaagccatgagcctgagtttgattatttgaagagtttggagattgaggagaaaatc
aacaagatccggtggtgccaaacagcaaatggtgccgttttccttctatctactaatgac
aaaactattaagtattggaaggtccaagagaagaaagtaaagaaaatatctgaaatgaat
attgacccttcaaaagctgctggaaatggcagtgtagccagttcgagtttatgctccagc
ccaaagcagtgtcttgcaaatggtggctgtggagataaagcttacagttctttgagcaat
gatttatcatttctgcctgaaggcatcccctcactccgtttgcccatggtaacgagcaac
gagaccagccttcttgcaaggtgtagaagagtgtatgcacatgctcatgactaccatatt
aattctatatccaataacagtgatggtgaaacattcatatcagccgatgatctccgaata
aacctttggaacttggaaataagtaatcaaagtttcaatattgtcgatgtcaagccagca
aatatggaagatcttactgaggtgataacatcagcagaattccatcctacacattgtaac
acattagcttatagtagttcaaaaggatcagttcgtttaatagatttgcggcagtcagca
ttgtgtgactcacattctaaattgtttgaggaacaggaagcacctggttcaagatctttt
ttcaccgagataattgcttcaatttcagatataaaatttgcaaaggatggaagatacata
cttagtcgtgactacatgacccttaagctatgggatataaatatggattcaggtccagtt
tcaacattccaggttcatgaatatttaagaccaaagctttgtgacttatatgagaatgat
tccatctttgataaatttgagtgttgccttagtggtgatggttcgcgagtagcaacgggg
tcttacagcaatcttttccgcgtgtttggttgtgctgcggggagcactgaagcaactacc
ttggaagcaagcaaaaatcctatgagaaggcaagtccagactccttcaaggccatccagg
tccctgagcagcagtttaacacgtgttgtcaggagaggagcagataatgcaagtgttgat
gcaaatggaaactcatttgatttcacgacaaaactgcttcatctggcatggcatccgact
gaaaattccatagcctgtgctgccgcaaacagcttgtatatgtattacgcataa
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