Solanum tuberosum (potato): 102586405
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Entry
102586405 CDS
T02981
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
sot
Solanum tuberosum (potato)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
YgbB
AAA_30
ERCC3_RAD25_C
zf-CCHC_4
AAA_19
Cas3-like_C_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
102586405
NCBI-ProteinID:
XP_006355275
LinkDB
All DBs
Position
Un
AA seq
744 aa
AA seq
DB search
MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSTEKSNFHVHVRLRRPFLASAVVT
PNSSVLSEEAFKGIGGFGKDSLNVSESEYDSEDEVEDNESNEDELAVSKLGLPHRLVEAL
EKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPVLKKLSTDEEMRNTQRRG
RLPKILVLAPTRELANQVEKEMKESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPGR
LIDLINNNTLKLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWVK
KLSRKYLNNPLTIDLVGDQDEKLAEGIKLYALSATSTSKRSILGDLVTVYAKGGKTIVFT
QTKRDADEVSMALSNSISSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN
VDLVIHYELPNDPETFVHRSGRTGRAGKEGIAILMYTGSQRRTVRSLERDVGCKFEFVSP
PSVKEVLESSAEHVVAALTGVHPESVEYFIPTAQQLMEQQGVNSLAAALALLGGFSKPPS
SRSLITHEQGWTTLQLTRDSENSRGFLSARSVTGFLSDVYSPAADEIGKIHLIADERVQG
AIFDLPEEIAADLLNQELPPGNTISKITKLPALQDDGPAGDFYGRFSSRDTRGTRGGFRD
RRGRYSQGSSSGRFSDNDDDNWGNDSRSRGGRTRRGGSDWLISGDRRSSRSLSGGSRDRS
FGGACFNCGRSGHRASECPNKRDY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcttcttccattataggagtttcctccatataccaaaccaatccttcactc
gaactctctcgaagacccactgctacccctcctttatctcttcctttctccactgaaaaa
tccaattttcatgttcatgttcgtctcagacgtccttttctggcttctgctgtagtaact
cctaattcttctgtgcttagtgaagaagcgtttaagggaattgggggtttcgggaaggat
tctttgaatgttagcgaaagtgaatatgattctgaggatgaggttgaggataatgagtca
aatgaggatgaacttgctgtatccaaacttggtttacctcacaggcttgttgaggctctt
gagaagcgtggaattactcaacttttcccaattcagagagctgttctagtgccggcactg
gagggtcgggatataattgctcgtgcaaagacagggacggggaagacacttgcctttggt
attccagtattgaaaaagcttagtacggatgaagaaatgagaaatactcagagacgggga
cggcttcccaaaattttggtacttgcacctactcgagagttagccaatcaagttgagaag
gaaatgaaagagtcggcaccatacttgaacactgtctgcatatacggaggcgtttcttat
gctacacagcaaaatgcactttcccgtggggttgatgttgttgttggaactccaggtaga
cttattgacctgataaacaataacaccttgaaacttggggaggtggaatatttggtcctc
gacgaggctgatcaaatgctcgcagttggatttgaggaagatgtagaagttattttggaa
aaacttccaccacagaggcagagcatgcttttctcagccaccatgcctggctgggtaaag
aagctgtccaggaagtatttgaacaatcctttgacaattgacttggttggtgatcaagat
gaaaagctggcagaggggatcaagctatatgctctatcagctacatcaacatcaaaacga
tctatacttggtgatcttgttacagtttatgcaaagggcggaaagacaattgtttttaca
cagacaaaacgagatgctgatgaggtttcaatggcattatcaaatagcatttcttctgag
gcactgcatggagacatttctcaacatcagagggaaagaacactaaatggatttaggcaa
ggaaaattcactgtgctagttgcgactgacgttgcatctcgtggtcttgatatacctaat
gttgacttagtaatccattatgaactacccaacgatccagaaacttttgttcatcgctct
ggtcgaacgggccgtgctggaaaagaaggcattgccattctgatgtacacaggtagtcaa
aggcgaactgtcagatctctcgaacgcgatgttggatgcaagtttgaattcgttagtcct
ccatctgtcaaagaggttttagagtcatcagctgagcatgtggtggctgcacttactgga
gttcatcccgaatctgttgagtacttcattccaactgcacaacagttgatggagcaacaa
ggagtaaattcccttgctgctgcacttgctcttttgggtggattttccaaaccgccatct
tctcgatctctaataactcatgaacagggttggactacattacagctgacacgtgattct
gaaaattcccgaggattcctgtcggcaagatctgttactggtttcctctctgatgtctat
tcaccagctgctgatgaaattggcaaaattcacctaattgcagatgaaagggttcagggg
gccatctttgatcttcctgaggagattgctgcagatctactaaatcaggagttaccacct
ggaaatactatttccaagattaccaagttacctgctttacaagacgatgggccagctggt
gatttctatgggaggttttcaagcagggatactagggggacacgaggaggttttagagac
cgtagaggcagatattctcagggttcttctagtggccgtttctctgataatgatgatgat
aattgggggaatgactctaggtcgcgaggtggccggacaagaaggggaggaagtgattgg
ctcatcagtggtgataggcgctctagcaggtctttatctggaggaagcagagacagaagc
tttggtggtgcatgtttcaattgtgggcgcagtggtcaccgagcatctgaatgccctaac
aaaagggactactag
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