Solanum tuberosum (potato): 102586674
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Entry
102586674 CDS
T02981
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102586674
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102586674
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
90S particles
Helicases
102586674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
T4SS-DNA_transf
ParD_antitoxin
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
102586674
NCBI-ProteinID:
XP_006361791
UniProt:
M0ZNF8
LinkDB
All DBs
Position
Un
AA seq
547 aa
AA seq
DB search
MEKDASFLFGGISFNRKKFARDFDRFKGKNIVDSAEKLQLIEKEDKTFDDSLEKVEFVEN
EISEMEDETSTSVSKKRKRKEKGTVSDSVEGFSVFKSSKLKKEAASEETDQSVNELIQGK
KEYYQQLERDAIFRKMHNIHVSGSNIPSPLHNFAELRSRYKCRSYLLRNLAKLGFKEPTP
IQRQTIPVLLSGRECFACAPTGSGKTFAFVFPILMKLKHTSKDGVRAVILSPTRELAAQT
TRECKKLARKKFYIRLMTKQLAKSGDFSKLRCDVLISTPLRLKFAIQKRKLDLSRVEFLV
LDESDKLFEPGMLEQVDFVVKACTNPSILRSLFSATLPDIVEDRARTIMHDAVRIIIGRK
NSASETIEQKLVYVGSEEGKLLALRQSFAESLNPPVLVFVQNKERAKELYDELKLEDIRP
DVIHSDLSQIQRENAIDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDAAAAYIHR
IGRSGRAGRSGQAITFYTEADIPFLRNIANVITSSGGEVPEWIMSLTKKKWRKHRPKRET
ISTQPDI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatgcatctttcttgtttggtggcatatctttcaaccgcaaaaagtttgct
cgcgatttcgacagatttaaggggaaaaacatagttgattcagctgagaaattgcaattg
attgagaaggaggataaaacttttgatgattcgttagagaaagtggagttcgtcgagaat
gagatatctgaaatggaggatgagacaagtactagcgtgagtaagaagaggaagaggaag
gagaagggaacagtttctgattcagtggaaggattttccgtcttcaagagttcaaaattg
aaaaaggaagctgccagcgaagagactgatcaatctgtaaatgaactgattcagggaaag
aaagaatattatcaacaattggagagggacgcaatttttcggaagatgcacaacattcat
gtttcagggagtaacatcccttcgccattgcacaattttgctgaattaagatcaagatat
aaatgtcgatcatatctattacgaaatctggcaaaactgggatttaaagaaccaacgcca
atccaaaggcagactattccagtcctcttatctgggcgggaatgctttgcttgtgcacct
actggttctggcaaaacatttgcttttgtttttcctatacttatgaaactcaagcacact
tcaaaggatggtgtccgagctgtaattctttcccctacaagagagttagctgctcagaca
acaagagaatgcaaaaagttggccaggaagaagttctacatcaggttgatgactaaacaa
ctcgctaaaagtggggacttttctaaactgcgatgtgatgtactgatctcgacaccattg
cgcttaaagttcgctatccaaaaaagaaagcttgatttaagtagggttgaatttcttgtc
ttagatgagtctgataagcttttcgagcctggcatgctagagcaggttgattttgtggtg
aaggcgtgcacaaatccttcaattcttcggtcattgttcagtgctactttacccgatata
gttgaagaccgagcacgtacaataatgcatgatgctgttcgaataattattggtaggaaa
aattcggcttctgaaacaatagagcaaaaattggtatatgtaggaagtgaagaagggaag
cttctggctcttcgtcaaagctttgcagagagtttgaacccaccagtgctagtatttgtt
caaaacaaggagcgtgcaaaggagctatatgacgagctaaaattggaagatattcgaccc
gatgttatccattcagacctttctcagatacagagagaaaatgctattgataactttaga
gctggaaaaacatgggttttaattgccactgatgttgttgcccggggtatggatttcaaa
ggggtcaactgcgtgataaattatgatttcccagacgctgctgcagcatatattcacaga
attggacgttctggcagagcaggaaggagtggacaggcgataacattttatactgaagca
gatattccatttttgaggaacatcgcaaatgttattacgtcttctggtggtgaggttcca
gagtggatcatgtctctgaccaagaaaaagtggaggaaacacagaccaaaaagagaaacc
atttcaactcagccagacatatga
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