KEGG   Solanum tuberosum (potato): 102587272
Entry
102587272         CDS       T02981                                 
Name
(RefSeq) nuclear pore complex protein NUP62
  KO
K14306  nuclear pore complex protein Nup62
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102587272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102587272
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102587272
SSDB
Motif
Pfam: Nsp1_C Nucleoporin_FG COG3_N ATG17_like
Other DBs
NCBI-GeneID: 102587272
NCBI-ProteinID: XP_006347924
LinkDB
Position
Un
AA seq 798 aa
MSTGFSFSSSSSPFSFSSNPSFSTTPSVTATTSSASGSSPFSSPFSNPNPNPTSSAPSFG
FGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFG
FGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFGFGSNTSASTPSFGFS
SSAASGSSPQPTLFGSSSGSGATSNLFGSSSGSGMTTNLFGSTTSASGSPLFGVNSASAA
ANSSPFGSSLFVSSGTPSPGLFGSSSAAGSSSGLGLFGSSPFLSSTTASTGNAATSASTT
PFSSSLFGSSSSASSSLFGSSSTAPSFGFPSSAASLSFQSASNSASSSPGLSFASSAAAS
SFSSSSVFSFPGASPASSASSAPAFSLLSTSTTTSVASAPGFSLAAASTSSAVSSPAFSF
LTSSSAASVAKGTGSSVTASAASSSAPVSKPASTGFSISSSPLFSTVTTPTSISTTAAAT
GASSTTSGTGLSLTFPAPTSSASTTSAVDTSPIAGFGTSAPSTGFSLSSKASAPALSSQP
QSTAAVLSFGVPSTTSATATSTAAQTSSPLTVASSSGTTSTSTVVATSTPKLPSEITGKS
VEEIIKEWNAELQERTAKFRKQANVIAEWDKRILQNRDILLKLESEVAKVVETQGSLERQ
LDLIETHQEEVDKALQSMEEEAERIYKDERGVILDDEAAATRDAMYEQAEFVEREMEKMT
EQIKSIINTFNACQGGELEATDGMTPLDVVVRILNNQLSSLMWIDEKTEEFSSRIQKLAS
EGPAANRESTAPKLWLTR
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgtcgacaggcttttcattctcctcttcttcttcacccttctctttctcttcaaacccg
tctttttccaccaccccctctgtcaccgctaccacatcgtctgcttccggttcttcccca
ttttcctcgcccttctcaaaccctaaccctaaccccacctcctctgctccttcttttggc
ttcggtacatctactacttcagcctcttctgctccttctttcggcttcggtacatctact
acttcagcctcttctgctccttctttcggcttcggtacatctactacttcagcctcttct
gctccttctttcggcttcggtacatctactacttcagcctcttctgctccttctttcggc
ttcggtacatctactacttcagcctcttctgctccttctttcggcttcggtacatctact
acttcagcctcttctgctccttctttcggcttcggtacatctactacttcagcctcttct
gctccttcttttggtttcggctctaataccagtgcttctacaccgtcgtttgggttttca
tctagtgctgcttctggttccagtccccaaccaactctatttggatcttcttccggttcg
ggtgcaacttcaaacctattcggatcatcttccgggtcgggtatgactacgaacctcttc
ggatccactacatctgcaagtggttcaccattgtttggggtgaattcagctagcgccgct
gcgaattcatccccttttgggtcttcactgttcgtgtcttcaggtacgccctcgccgggt
ttgtttgggtccagttcggctgctggttcaagttcgggcttgggcttgtttggttcttct
ccgtttttatcatcaactactgcttctactggaaatgcagcaactagtgctagtacaact
ccattttcttcatctctatttgggtcttcttcttcagcatcatcttcactttttggatca
tcttcaacagctccttcatttggttttccgtcatcagcggcctcactttcgttccagtcg
gcgtcaaattcagcttcttcttcacctggactttcgtttgccagctcggcagctgccagt
tccttttcttcttcatctgtattttctttccctggtgcttcacccgcaagttcagcttct
tctgcgccggcattttcattgttaagtacttcaaccaccacttccgtagcttctgcaccg
ggattttcgcttgctgctgcatcaactagttctgcagtgtcctcaccagcattttcattt
ttgacctcgagctcagcagcatcagttgcaaaagggacaggaagctctgtaacagcttct
gctgcttcttcaagtgctccggtgtcaaaacctgctagtactgggttttcaatttcttca
tcgcctttgttttcaactgttactacccccaccagcatttctacaactgcagctgctact
ggagcttcttctacaactagcgggactggtttatctctgacatttcctgcacccacctct
tcagcttcaacaactagtgctgttgatacatctccgattgctgggtttggcacctctgcc
ccatctacgggtttttcattgtctagcaaagcatctgcaccagctttatcctcacagcct
caatcaactgcggctgtgctaagctttggtgtcccaagcacaacttctgccactgcaaca
agtacagctgctcaaacatcatcacccttgactgtggcttctagtagtgggactacttca
acttctactgtagttgccacttccacaccaaaattaccatcagaaattactggaaagtct
gtagaagagatcatcaaggaatggaacgctgagctgcaggaacgtactgcaaaatttaga
aagcaggctaatgtgatagctgagtgggacaaaaggatcttgcagaaccgtgatattctt
ctcaaacttgagagtgaagttgcaaaggttgttgagacacaaggcagcttagagcgacag
ctggatctaattgagactcatcaggaagaggttgacaaggcattgcaaagcatggaagaa
gaagctgagcgaatttacaaagatgagagaggagtgattcttgatgatgaagctgcagca
acaagggatgcaatgtatgaacaggctgagtttgtggagagggaaatggagaaaatgaca
gagcagatcaagtcaatcattaatacttttaatgcttgccagggtggagaacttgaggca
actgatggaatgacaccgcttgatgttgttgtacgaatcttgaacaatcaattgagttca
ctgatgtggattgatgaaaagactgaagaattctcatctcgtattcagaagcttgcaagt
gaagggcctgctgccaatcgtgaatcaactgcccctaaattatggttgactcgatga

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