Solanum tuberosum (potato): 102587272
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Entry
102587272 CDS
T02981
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102587272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102587272
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102587272
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
COG3_N
ATG17_like
Motif
Other DBs
NCBI-GeneID:
102587272
NCBI-ProteinID:
XP_006347924
LinkDB
All DBs
Position
Un
AA seq
798 aa
AA seq
DB search
MSTGFSFSSSSSPFSFSSNPSFSTTPSVTATTSSASGSSPFSSPFSNPNPNPTSSAPSFG
FGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFG
FGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFGFGSNTSASTPSFGFS
SSAASGSSPQPTLFGSSSGSGATSNLFGSSSGSGMTTNLFGSTTSASGSPLFGVNSASAA
ANSSPFGSSLFVSSGTPSPGLFGSSSAAGSSSGLGLFGSSPFLSSTTASTGNAATSASTT
PFSSSLFGSSSSASSSLFGSSSTAPSFGFPSSAASLSFQSASNSASSSPGLSFASSAAAS
SFSSSSVFSFPGASPASSASSAPAFSLLSTSTTTSVASAPGFSLAAASTSSAVSSPAFSF
LTSSSAASVAKGTGSSVTASAASSSAPVSKPASTGFSISSSPLFSTVTTPTSISTTAAAT
GASSTTSGTGLSLTFPAPTSSASTTSAVDTSPIAGFGTSAPSTGFSLSSKASAPALSSQP
QSTAAVLSFGVPSTTSATATSTAAQTSSPLTVASSSGTTSTSTVVATSTPKLPSEITGKS
VEEIIKEWNAELQERTAKFRKQANVIAEWDKRILQNRDILLKLESEVAKVVETQGSLERQ
LDLIETHQEEVDKALQSMEEEAERIYKDERGVILDDEAAATRDAMYEQAEFVEREMEKMT
EQIKSIINTFNACQGGELEATDGMTPLDVVVRILNNQLSSLMWIDEKTEEFSSRIQKLAS
EGPAANRESTAPKLWLTR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaggcttttcattctcctcttcttcttcacccttctctttctcttcaaacccg
tctttttccaccaccccctctgtcaccgctaccacatcgtctgcttccggttcttcccca
ttttcctcgcccttctcaaaccctaaccctaaccccacctcctctgctccttcttttggc
ttcggtacatctactacttcagcctcttctgctccttctttcggcttcggtacatctact
acttcagcctcttctgctccttctttcggcttcggtacatctactacttcagcctcttct
gctccttctttcggcttcggtacatctactacttcagcctcttctgctccttctttcggc
ttcggtacatctactacttcagcctcttctgctccttctttcggcttcggtacatctact
acttcagcctcttctgctccttctttcggcttcggtacatctactacttcagcctcttct
gctccttcttttggtttcggctctaataccagtgcttctacaccgtcgtttgggttttca
tctagtgctgcttctggttccagtccccaaccaactctatttggatcttcttccggttcg
ggtgcaacttcaaacctattcggatcatcttccgggtcgggtatgactacgaacctcttc
ggatccactacatctgcaagtggttcaccattgtttggggtgaattcagctagcgccgct
gcgaattcatccccttttgggtcttcactgttcgtgtcttcaggtacgccctcgccgggt
ttgtttgggtccagttcggctgctggttcaagttcgggcttgggcttgtttggttcttct
ccgtttttatcatcaactactgcttctactggaaatgcagcaactagtgctagtacaact
ccattttcttcatctctatttgggtcttcttcttcagcatcatcttcactttttggatca
tcttcaacagctccttcatttggttttccgtcatcagcggcctcactttcgttccagtcg
gcgtcaaattcagcttcttcttcacctggactttcgtttgccagctcggcagctgccagt
tccttttcttcttcatctgtattttctttccctggtgcttcacccgcaagttcagcttct
tctgcgccggcattttcattgttaagtacttcaaccaccacttccgtagcttctgcaccg
ggattttcgcttgctgctgcatcaactagttctgcagtgtcctcaccagcattttcattt
ttgacctcgagctcagcagcatcagttgcaaaagggacaggaagctctgtaacagcttct
gctgcttcttcaagtgctccggtgtcaaaacctgctagtactgggttttcaatttcttca
tcgcctttgttttcaactgttactacccccaccagcatttctacaactgcagctgctact
ggagcttcttctacaactagcgggactggtttatctctgacatttcctgcacccacctct
tcagcttcaacaactagtgctgttgatacatctccgattgctgggtttggcacctctgcc
ccatctacgggtttttcattgtctagcaaagcatctgcaccagctttatcctcacagcct
caatcaactgcggctgtgctaagctttggtgtcccaagcacaacttctgccactgcaaca
agtacagctgctcaaacatcatcacccttgactgtggcttctagtagtgggactacttca
acttctactgtagttgccacttccacaccaaaattaccatcagaaattactggaaagtct
gtagaagagatcatcaaggaatggaacgctgagctgcaggaacgtactgcaaaatttaga
aagcaggctaatgtgatagctgagtgggacaaaaggatcttgcagaaccgtgatattctt
ctcaaacttgagagtgaagttgcaaaggttgttgagacacaaggcagcttagagcgacag
ctggatctaattgagactcatcaggaagaggttgacaaggcattgcaaagcatggaagaa
gaagctgagcgaatttacaaagatgagagaggagtgattcttgatgatgaagctgcagca
acaagggatgcaatgtatgaacaggctgagtttgtggagagggaaatggagaaaatgaca
gagcagatcaagtcaatcattaatacttttaatgcttgccagggtggagaacttgaggca
actgatggaatgacaccgcttgatgttgttgtacgaatcttgaacaatcaattgagttca
ctgatgtggattgatgaaaagactgaagaattctcatctcgtattcagaagcttgcaagt
gaagggcctgctgccaatcgtgaatcaactgcccctaaattatggttgactcgatga
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