Solanum tuberosum (potato): 102587405
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Entry
102587405 CDS
T02981
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102587405
Membrane trafficking [BR:
sot04131
]
Autophagy
Other autophagy associated proteins
Others
102587405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_2nd
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
102587405
NCBI-ProteinID:
XP_006355218
LinkDB
All DBs
Position
Un
AA seq
468 aa
AA seq
DB search
MWSCTLSESFALVPCPQLETIHLSYFVIKPDTEFIYVSLSMDTPSPFSPPFPLPNTSSKF
QSLNLQRYLEQPEAQQHQLQPQQAAVEQVNDESLHGSSIKNPESGVGSNHVFVNHSATAY
HVTFNQDYGCFAIGTDRGFGVYNCVPFGESFCRNFENIGGIGIIEMLFRSNILAFVGHGD
HPQYPRNKVMIWDDQQSRCIHELCFRSEVRRIRLRKDCLVVVLEHKIFVYNFSNLELLFQ
IETTTNPKGLCEVSQTADQLVLVCPGLQKGQVWVKHNASKSTKSIVAHDSVLACFALTRE
GNLLATASTKGTLIRIFNTLEGTLLQEVRRGLDRAEIYSLSFSPTAQWLAVSSDKGTVHV
FSLKVNLGNRSTDKSNCSSNSRVPVAASSSFSFIRGALPKYFSSEWSVAQFRLPGVSQYI
VTFGNENNTLTILGWDGSFFRCKFDPASGKEMTQLEYHNFLEPEEPCN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcctgtacgttgtctgaaagctttgctttagtgccatgccctcagttagaaaca
atacatctttcttactttgtaattaagcctgatactgaattcatctacgtatccctatcc
atggatactccttcaccattctcccctccctttccactcccaaatactagctcaaagttt
cagtctctaaatctccagcgttatttagagcaaccagaagcacaacaacatcagctgcag
ccacaacaagctgctgttgagcaagtaaatgatgagtctcttcatggttcatctatcaaa
aaccccgaatcaggtgttggttctaatcatgtctttgtcaatcattcagcaactgcatac
catgttactttcaatcaagactacggctgttttgctatcggcactgatcgcggttttgga
gtatataactgtgtccctttcggtgagtccttttgtcgaaactttgaaaatataggtggt
attggaattattgaaatgctctttcggagtaatatattagcctttgttggacatggagac
cacccacaatatccccgaaacaaggtcatgatctgggatgatcagcaaagccgttgcatc
catgagctctgtttccggtcggaggtgcgccgcatcaggcttcggaaggactgcctcgtg
gtagttcttgagcataagatatttgtctacaatttttctaatctggagttgttgtttcaa
attgaaacaactacaaacccaaaggggctctgtgaggtttcacaaactgctgatcaactt
gtcttggtgtgccctggtctgcaaaagggtcaagtttgggtcaaacataatgcttcaaaa
agcacaaaatctattgtagcacatgattcagttcttgcatgttttgctcttacgagggaa
ggcaacctactagcaacagcaagcaccaagggtacactaatccggattttcaacacgcta
gaaggtacattgttgcaggaggtaagaaggggtttggatagagcagaaatatatagtttg
tcattctctccaactgctcagtggctagctgtctccagcgacaaaggcactgttcatgtt
ttcagccttaaggtcaatctagggaacaggagtactgacaagtcaaattgttcttccaac
tcccgtgttcctgtggcagcctctagttcattctccttcatcagaggagctcttcccaag
tattttagctcagaatggtctgtggctcaattccgactgcctggtgtttctcaatacatt
gttacatttggcaacgaaaataatacacttacaattctcggctgggacggaagctttttc
agatgcaagtttgacccagcatccggcaaagagatgactcagttggaatatcacaacttt
ctggagcctgaagaaccttgtaattga
DBGET
integrated database retrieval system
