Solanum tuberosum (potato): 102587912
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Entry
102587912 CDS
T02981
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sot03036
]
102587912
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102587912
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DUF4399
Motif
Other DBs
NCBI-GeneID:
102587912
NCBI-ProteinID:
XP_006347926
LinkDB
All DBs
Position
Un
AA seq
873 aa
AA seq
DB search
MNFEQRLIAAAKFVYTGDSVADDPPVNSVDLGVKATLKPHQVEGVSWLVRRYLLGVNVIL
GDEMGLGKTLQAISLLSYLKVYLKTPGPFLVLCPLSVTDGWMSEMANFAPKLRVLTYTGE
KEHRRNLRRKIYECMNREASDAKSLPFDVLLTTYDIVLLDEDFLSQVPWCYAIIDEAQRL
KNPSSVLYNVLKERFVMPRKLLMTGTPIQNNLSELWALLHFCMPSVFGTLEQFLSAFKEA
GDPSCPDADKAKEQFKILKYVIGAFMLRRTKSQLIELGTLVLPPLTEITVMAPLVALQKK
VYMSILRKELTQLLALASGAPNTRSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQA
SGKLLILDHLLQKLHACGHRVLLFSQMTQTLDILQDYLELRKYSYERLDGSIRAEERFAA
IRSFSHNRSKFEAEQNAAFVFLISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH
RIGQTNHVLSINLVTEQSVEEVIMRRAQRKLQLSHNIIGDDVLDQEGKEMAGAEAGDLRS
VMLGLHMLDPAEVTNEESDKFDRNELTAMAETIMAFRNEERSARDDKFEVKPANFLNEFN
VVTKRGPESIKLDHILDETSYLEWVEKFKEASQINHNPIFELGNRPSLPEEKHLKAEAAK
KKAEEEKLSKWETLGYHSLSVKDPVSAPDTDISSDSGAVHFVYGDCTRPSKVSPSEPTII
FSCVDTSGNWGHGGMFDALARLSTSVPAAYERASEFGDLHLGDLHLIEITEDLAKGGDSP
HAPQWVALAVVQSYNPRRKVPRGSVSIPDLERCLSKASYSAAQKSASIHMPRIGYQDGSD
RSEWYTIERLLRKYAALHGINIFVYYFRRASQS
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgaacagagattaatcgctgcggcgaagtttgtctacaccggcgattcagtt
gccgatgatccgccggtcaactccgttgacttaggagtcaaagcgactcttaaacctcac
caagttgaaggagtctcatggctcgtccgaagataccttctcggcgtcaacgtcattctc
ggggatgagatgggattggggaagactttgcaagctatatcattgctgagctacctgaaa
gtctatctgaagactcctggaccattcttggtactctgtcctcttagcgtgacggatggt
tggatgtctgaaatggccaattttgccccaaaattgagagtgctaacctatactggagaa
aaggagcatcggcgcaacttacgtaggaagatatatgagtgtatgaacagggaggcgtct
gatgcaaaatcactaccttttgatgtgcttttaactacttacgacatagtattacttgat
gaagattttctatcccaagttccatggtgttatgcaataattgacgaagcacagaggctc
aagaatccatctagtgtcctgtataatgtgctcaaagagcgttttgttatgccaaggaaa
ttgctgatgactggcacacccatccaaaacaacctttcagagctttgggctcttttgcac
ttttgtatgccttcagtttttggaacactggagcagttcctctctgcattcaaggaagct
ggagatccatcatgtcctgatgcagacaaagctaaggaacaattcaaaattttgaaatat
gtaataggggcgtttatgctccgacgaactaaatctcagcttatcgagttggggactctt
gtgctgcctcctcttactgagattactgtgatggcaccactggtggccctgcaaaagaag
gtatatatgtccatactaaggaaggagctaactcagctgctagcacttgcttctggagca
cccaatactcggtcgttgcagaatattgtaattcaactacgaaaagcatgtagtcatcct
tacctttttgctggtatagaaccggaaccatatgaagaaggagaacacctagttcaggct
agcggcaaactgctaatattggatcatcttcttcaaaaacttcatgcttgtggacatagg
gttcttcttttctctcagatgactcaaacacttgatatactgcaggattatctggaattg
aggaagtattcttatgagcgtcttgatggttcaattcgtgcggaagagcgctttgctgca
atcaggagctttagtcataatagatcaaagtttgaagctgaacaaaatgcagcatttgtt
ttcttgatttcaacaagagctggtggagttgggttgaatcttgtggctgctgatacagtc
atattttacgagcaagattggaatcctcaggtagacaagcaggccttgcagcgtgctcac
cgaattggtcaaacaaaccacgtgttatctataaatttagtcacagagcagtcagtggag
gaggtcatcatgcgtagagctcaacggaagttacagcttagccacaacattataggagat
gatgtcttggatcaggaagggaaagagatggcaggagctgaagctggtgacttgcgatct
gttatgcttggcttgcatatgctagatcctgcagaagtaaccaatgaagaatcagataaa
tttgataggaatgaattgactgcaatggcagaaacaattatggcttttcgcaatgaagaa
cgttcagctagagatgacaagtttgaggttaagccagctaacttcttaaatgagtttaat
gtggttacaaaaaggggtccagagtctattaagcttgatcacattcttgatgaaacttca
tatctcgagtgggttgagaaattcaaggaagcatcacagatcaaccataatccaattttc
gagctgggaaacaggccaagcttgcctgaagaaaaacatctaaaagctgaagctgcaaag
aaaaaggcagaggaggagaaattgtcaaaatgggagactcttggataccactccttatcg
gtcaaagatcctgtatcagctcctgatactgatatctcctctgattctggagctgtccac
tttgtttacggggactgcacccgtccttctaaagtgtctccatcagagccgaccatcata
ttcagctgtgttgatacatcaggaaactggggtcatgggggtatgtttgatgcattggca
agactgtcaactagtgtacctgcagcatatgagcgagcgtctgaatttggtgatcttcat
ctaggcgatctccatcttatagagatcacagaggatctagctaagggcggtgattcacct
catgctcctcaatgggtagctttggctgttgtgcagtcatacaaccctaggcgcaaagtc
ccacgcggcagtgtctccatccccgacttggagagatgtctgtcaaaggcatcgtattca
gctgctcagaagtccgcatcaatccacatgccaagaatcggttatcaggatggttctgac
aggtcagaatggtatacaattgaacgtctgctgcggaagtatgctgctctccatggcata
aatatttttgtgtattatttccgacgtgcatctcagagctaa
DBGET
integrated database retrieval system
