Solanum tuberosum (potato): 102588082 Help Entry 102588082         CDS       T02981                                  Name (RefSeq) uncharacterized LOC102588082   KO K24155   rabconnectin-3a Organism sot  Solanum tuberosum (potato) Pathway sot04142   Lysosome Brite KEGG Orthology (KO) [BR:sot00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     102588082  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sot04131]     102588082 Membrane trafficking [BR:sot04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     102588082  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     102588082    RAVE complex     102588082 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_IFT140_1st ANAPC4_WD40 EIF3I Beta-prop_TEP1_C Motif Other DBs NCBI-GeneID:  102588082 NCBI-ProteinID:  XP_015167878 LinkDB All DBs Position Un AA seq 2515 aa AA seqDB search MESHKISCCNTADDVVSKLPLQLIKSEIIPPAPNRSKSPSEFEPAIDWQPNFAGYSWIAY GASSLLVIRQFPNPLSQTETVIGTVFQQVLELSIDGTGTVSAVAWSPVTPSSGDLAAALD NCIGLFSYNSDASHSSFYWSQTSTLVQSTKVDSITWTGSGDGIISGGIELILWRKKERSW EIAWRFKAELPQTLISATWSIEGPFAAAPPYRLHFEGSGSHIHAGNKCVLVGQIDADSRH LEAMLPHPLPVSMIQWRPSTVTHSTRDGRYSSRLVLLTCCLDGATRLWTEIDDGRVRKVG KDGNEHKMNKFSFRVIAVVEVNQALNGRLGLDVSVRWATDINGIITVNGEAVSYASPDEH QHGNASRCEWLVAVGPQTTLTFWAIHCLDDFSPLRAPRVTLWKRKELNSPKEMPRGLLLN KVFIMRNQVFGPPTVCSFINLLPSNYLAWMQFYSSKFPSGAKVSSELISTEDSTPNKCQS ECLLSLCATGISTMDSHSNKILQVAVHPCLSELEIASSLDTDGKLLFWLFSSASNTILGL PTLSPSWKLFGKGATALPQPKYTSLSWAPTLLSEERILVIGHADGIDFLLVKALKAEELE MVCHKICTIPLTAGSQEEGPDSVFSIPLPATCNKTFISNSFLLLAVWKKGFQALSWKIYL HHYDLSGSRCGCSFDSTNTFQDNIWKFESSYSGKVYLVSVEPCSSAFPDPHHHNKISSSA VICPTNSGFSEEIFANNLYSNYFAYHMVTGCVDGSLQLWRSVPAVSSNSQWDLVGTVALH QDPISAVSASVCGRKIATVSKEGPLSASTTIHIWECVRVEGTGSFILEDTLYFDGDVVAS NWLTIGNGQFLLGVCSRDKLHVYAQKRCGGQCNLEPERSLEGNIWLCLATSHTNPTIQDF FWGPKTMIVVVHDEYISVFSKFSYFMDKKLMPQLGAEVCGESSICQYGSNKVPVFYGHEN CDNAQRQSDFPLNMEVVNETSLFSSMTKSKEGSTSVKNGIWSILEIAELVGGSLPLVHPE AFLVNLLSGNWKRSYVALQCLSKHVTSTKLSVKICCLRAFSGLIFPISLSNYLEGNVLLS SGEKSFQWGGPSDSSSWGYAASDNALSISSTRSEITDFIEAVDKLQKFATISATEMMQIR AAIHLLDEVSNMQSTSAYNSLDGPGRRFWVSVRIQQLYFVQRFGRLPSEGELVVNSGLIG WAFHSDCQENLFDSLLSKQPSWQEMRDMGVGLWYTSVAQLRLKMEKLARQQYLKNKDPKA CALLYIALNRLQVLAGLFKISKDEKDKPLVAFLSRNFQEDKNKAAALKNAYVLLGKHQLE LAIAFFLLGGDTTSAVTVCAKNLEDEQLALVICRLVDGYGGTLERCLISKILLPSALAKV DYWLASVLEWMLGEYSQAYLRMLAYPTGSLNSKCIFSSRQPAFLDPNIGDFCLMLAAKTT MKNAIGEQNAASLSRWAILMRVTALSRCGLPLEALECLSSSVSVTGDSNRRSVPDNVDSG CLHELLSAMLNETSSNWLSLDVAFQIDSHMRSDLSMQYMSKMLKRHPSWVDNDMTCLQEQ MCTVSENQEYKLLIEAFQDELMTTIASFQLKFSLIPLHLIYSIFLSFCNHGLAYIGCHLL CDYINKYLSSEQGGGLDGCSLYPCLPELFLKVSGELFYIFARYIIMCSMDCIYLKSFTFR SDRADENIYCAIPELYKKRLCWSFWCIRAMMQFSSVSCTENFVGTHFTVLDLSEYLLLFA SAWVQRNFSDLILIVKPLLMTKFFDETDIKDIQKLLRESLGMMTSDLPNHAAGSSVQNKN LMPQAQFGDVILSVPEERWHVMVASFWGCVFSLLKPKLNQLCPELEESGLFLPPGRHPSI STSSILLNGNNVSTHNEMVPGLLAKILKVTCAHISSYCVNQFASVLLESIDTGATALFCS EDYQSQHKAPYTKLSHSNNDLDKVTGEDELSSFEALWDLCSELKKVNQDFVLQDQKCLQH TLHKSFKGWSEMYPSIVRECEVDETYDREERLGSPSSAAGSPLACLSPNNHPFQSFGVKD THHTKKVLPFRSPIEIYKRNGELLEALCINSIDQHEAALASNRKGLLFFKWEDGLPCGNK ADNVWAEADWPHNGWAGSESTPIPTCVSPGVGLGSKKGTHLGLGGATVGTGFLARPTFGL PGYAYTGGSSLGWGVQEDFDDFLDPPATVENVRTRAFSTHPSRPFFLVGSSNTHIYLWEF GKDRATATYGVLPAANVPPPYALASVSAVKFDHCGHRFVSAASDGTVCTWQLEVGGRSNV RPTESSLCFNNYTSDVTYVTSSGSIIAAAGYSSSGVNVVIWDTLAPPATSRASIMCHEGG ARSLAVFDNDLGSGSISPLIVTGGKGGDVGLHDFRYIATGKTKRQKHTEIGDHGVNSMVD TQKKTGDQNRHGMLWYIPKAHAGSVTKISTIPHTSFFLTGSKDGDVKLWDAKSAKLVFHW PKLHERHTFLQPSSRGFGGVVQAGVTDIQIVSHGFLTCGGDGTVKLVKLNDHLGL NT seq 7548 nt NT seq  +upstreamnt  +downstreamnt atggagagtcacaaaatcagttgctgtaatacagcggacgacgtcgtttcgaagttacca cttcagctgattaaatcggagataattcctccggcaccgaaccgatcaaaatctccttcc gaattcgagccagcaattgactggcagccgaacttcgctggctactcatggatcgcctat ggtgcctcgtctctcctcgtcatacgtcaattccctaaccctctatcacaaactgagact gtaatcggcacagtttttcagcaggttctcgaactgtcaattgatggcactggcactgtt tccgccgtagcttggtcccccgtgacgccttcttctggagacctcgctgccgcactcgat aactgcattggattgttctcttacaactctgatgcttctcatagttctttttattggagc cagacatcaacgctagtacaatccacaaaagtggactcaatcacttggacggggtcaggc gatgggataatttcaggtggcattgaattgatcttatggagaaagaaggagaggtcatgg gaaatagcttggagatttaaagcagaactgcctcagactctaatttctgctacttggtca attgaaggaccttttgctgctgcacctccatatagattgcactttgaaggttcgggttcc catatccatgcaggaaacaaatgtgttttggtaggtcaaatagatgcagattccagacat ttagaagctatgctaccacacccgttacctgtttctatgattcagtggagaccatctaca gttacacattcaactagagatggcagatattcaagcaggttggtgttattaacatgctgc ctagatggagctacaaggctctggactgagattgatgatgggagggttagaaaagttggc aaggatggtaatgaacacaaaatgaataaattctcttttcgtgttatcgctgtagttgag gtaaaccaagcattaaatggaaggctgggcttggatgtatctgtaagatgggcaacagat attaatggtataataactgttaatggtgaggctgtgtcttatgcttcaccagatgaacat caacatggcaatgctagtaggtgtgaatggctagttgctgtaggtccccaaacaacactg actttttgggccattcattgtctcgatgatttttctcccctgagagccccaagggtgaca ttgtggaaaagaaaagagttgaacagtcctaaagagatgccaaggggattgctcttaaat aaagtctttatcatgagaaatcaggtctttggtccaccaacagtatgttcttttattaat ctattaccgagtaactatctagcctggatgcaattttattcctcaaaattccccagtggt gcaaaggtatcttcagaactgattagcaccgaagattcgactccaaataaatgtcagagt gaatgtttgttatcattatgtgcaacgggaatttcaactatggacagtcacagcaataaa attctgcaggtagcagttcatccttgtttatcagagttggaaattgcttcctctttggac actgatggaaagctccttttttggttgttttcttctgcttcaaatactattttgggcctc ccaactttgagtccatcttggaaactttttgggaaaggtgctactgcactccctcaaccc aagtatacaagcttaagctgggctcccactctgttaagtgaagaacgaattctcgtcatt gggcatgcagatggaatagatttcttattagtcaaggctttgaaagctgaagaattggaa atggtttgtcacaaaatatgtacaataccacttactgctggaagtcaagaagaggggccg gatagcgtcttctcaattcctttgcctgccacttgtaacaaaaccttcatttccaatagc tttttgctgctagctgtgtggaagaaaggctttcaggctttatcgtggaaaatttacctt catcactatgatttgtctggaagtcgctgtgggtgcagttttgacagtacaaacaccttc caggacaatatatggaagtttgagagtagttattctggtaaggtgtaccttgtttctgtt gaaccttgttcatcagcttttccagaccctcatcaccataataaaatttcaagttctgct gtgatctgtcccacaaactctggattcagtgaagagatttttgctaataatttatatagc aactactttgcttatcatatggttactggttgtgttgatggtagtttgcaattatggaga agtgttcctgctgtgagctcaaattctcaatgggatcttgttggtacggttgctttgcat caagaccctatttcggcggtatctgcaagtgtctgtggccgaaagattgcaactgtatcg aaagaaggtccattaagtgcttctactactattcatatatgggaatgtgtgcgtgttgag ggtactggcagctttatactagaagacactttgtattttgacggtgacgttgtcgcttca aattggttgactattgggaatggtcagtttttacttggtgtttgctcaagagataagttg catgtgtatgctcaaaagagatgtgggggtcagtgcaatttggaaccggaaagatcatta gaaggcaacatttggttgtgtcttgcaacaagtcataccaatccaaccattcaggacttc ttttggggacctaaaaccatgatagtggttgttcatgacgaatacatttctgtatttagc aagttctcatattttatggacaagaaacttatgccccagcttggtgcagaagtttgcggg gagagttccatctgtcagtatggttctaataaagtgccagtattttatggtcatgaaaat tgtgacaatgcacagcgtcagtctgattttccgttgaatatggaagtggtgaatgagact tcactgtttagtagtatgacaaaatctaaagaaggctctacttctgttaaaaatgggatt tggagcattttagagatagcagaacttgtaggaggatctcttcctcttgttcacccggaa gcatttcttgttaacttactttcaggtaattggaaacgttcatatgtggctctgcagtgt ctcagtaaacatgttacttctacaaagttatcggtgaaaatatgctgccttcgtgccttc agtggtttaatatttcccatttcattgtcaaactatctggaaggaaatgtcttgttaagt tctggtgagaagtcatttcaatggggtggaccttcagattcctcaagctggggatatgct gcatctgataatgcgctctctatctcatcaacaagatctgaaataaccgactttattgaa gccgttgataaacttcagaaatttgcaactatatctgccactgaaatgatgcaaattcgt gctgctattcatcttctagatgaagttagcaatatgcagtccacttctgcttataatagc cttgatggacctggtcgtaggttttgggtttcagtgaggattcagcagctatattttgtt caaagatttggcagactgccatcagaaggtgagctggttgtgaactcgggactgattgga tgggctttccactctgattgccaagagaatttgtttgattctcttttatctaagcaacca tcttggcaagagatgcgtgatatgggtgttggactatggtatacaagtgtggcacaactg cgattgaagatggaaaagctggcaagacaacagtatttaaagaataaagatcccaaggca tgtgcacttctttatattgctttaaatagacttcaagtattggcgggcctttttaagatt agcaaagatgagaaagataagccattggtggcatttctttcacgcaattttcaggaagat aaaaataaggctgctgctctaaagaatgcctacgtcttactggggaaacatcagttggag ctcgcgattgctttctttttgcttggaggagatacaacgtctgctgttactgtttgtgca aagaatcttgaggatgagcagcttgctcttgttatttgtcgtcttgttgacggttatggt ggaacattagagcgatgtcttatttcgaaaatcctcctcccgtctgctcttgcaaaagtt gactactggcttgcaagtgttctagagtggatgttgggggagtattcacaggcttatctt agaatgcttgcttacccaacggggtctttgaatagtaaatgtatattttcatcacgtcaa cctgccttcttagatccaaatattggagacttttgtctaatgttagcagccaagactacc atgaagaatgctattggggagcaaaatgctgcttccttgagtagatgggcaatcttgatg agggtcactgccttaagcagatgcggactgcctcttgaagctttggaatgcctttcatct tctgtgagcgtcactggtgattcaaatcgacgaagtgtgcctgataatgtggactctgga tgcctgcatgaattgttgagtgcaatgctaaatgaaacttcatcaaactggctatcactg gatgtggcttttcagatagattcacatatgagatcagacttgtctatgcaatacatgtct aagatgttaaaaagacatccaagttgggtagacaatgatatgacatgtcttcaggaacaa atgtgtactgtatctgagaatcaagaatacaagcttttaattgaagcttttcaagatgaa ttgatgactacaattgcgtcctttcaactgaagttctccttaattcctctacatcttatt tactcgatcttcttgtcgttttgcaaccatggtttggcgtatataggatgccacttgttg tgtgactacataaataaatatctgtcaagtgagcaaggcggtggacttgatggttgctca ttgtatccttgcctcccagagctatttctcaaagtatctggagaactattttatattttt gcaagatacatcattatgtgtagcatggactgtatctacttgaagtcattcacctttagg agtgatagagctgatgaaaacatctattgtgccattccggagctgtacaagaagagatta tgttggtcattctggtgtattagagccatgatgcagttctcgtctgtttcttgtacagaa aattttgtagggacacattttactgtccttgatttgtcagagtatcttttactgtttgca tctgcctgggtacaaaggaattttagtgatcttatcctgattgtgaaacctctcttgatg acaaaattttttgacgagacagacataaaggacatacagaaacttcttcgtgagtctctc ggaatgatgacttctgatttacctaatcatgctgctggatcttctgttcagaacaagaat ctaatgccacaagcgcaatttggggatgtcatattgtcagttccagaggagagatggcat gtcatggttgcttccttttggggatgtgtatttagtcttttaaaacccaagttaaatcag ttatgcccggaacttgaagaaagcggtttgtttctacctccaggcagacatcccagtata tctacttcatcaattctcctaaatggcaacaatgtctcaacccataatgagatggttcca ggacttctggctaagatactaaaggtcacatgcgctcacatctcttcttattgtgtgaat cagtttgcatctgtcctgctggagagcatagatacaggtgcaactgcacttttctgttct gaagactatcagtcccaacataaagcgccatatactaaacttagtcatagcaacaatgat ctggataaggtgactggtgaagatgaattatcatcatttgaggcgttatgggatctttgt tctgagcttaagaaagttaatcaggattttgtgcttcaagaccagaaatgtttacagcat accttgcacaagtcctttaaaggatggagtgaaatgtaccccagcattgtcagagagtgt gaagttgatgaaacttatgacagagaagaaaggcttggtagtcctagtagcgcagctgga tctcctcttgcttgtttgtcgccaaataatcatccttttcaaagttttggggtaaaggat actcaccatacaaagaaggttttgccattccgtagtccgatagagatatataaaagaaat ggagaacttttggaggctttgtgcatcaactccattgatcaacatgaagctgctcttgct agcaatcggaagggtttattattcttcaaatgggaagatggacttccttgtggaaataaa gctgacaatgtctgggcagaggctgactggccacataatggttgggcgggatccgagtct acaccaattcccacttgcgtctctcctggagtgggtctggggagtaagaagggtacacac ctcgggttaggtggagcaactgttgggacaggttttttggcaagacctacatttgggctt ccaggttatgcctatacgggtggatccagtcttggctggggggttcaagaagattttgat gattttcttgaccctcctgccacagtagaaaatgttcggacaagggcattctcaactcac ccttcaaggccttttttcttggttggatcaagcaatacacacatatatttatgggagttt ggcaaagatagagctactgctacatatggagtgcttcccgctgcaaatgtccctccccca tatgctcttgcctcggtatctgccgtgaagtttgatcattgtggtcacagatttgtctct gctgcatcagatggtactgtgtgcacgtggcagcttgaagtaggagggaggagtaatgtt cggccaacagaatcatctctttgctttaataattatacatcggatgtcacatatgttact tcgagtggttcaatcatagctgccgcagggtatagctccagtggcgttaatgttgtcata tgggacacacttgctccaccagcaacgtctcgggcctcaataatgtgtcacgaaggaggt gcacgctctcttgcagtgtttgataatgatttaggaagtggttctatctctccactcatt gtaacgggtgggaaaggtggtgatgttggacttcatgacttccgatatatagctactgga aagacaaaaagacagaagcatacagaaattggtgaccatggtgtgaattccatggttgac acgcagaagaaaaccggtgatcagaatcgtcatgggatgctctggtatataccaaaggct catgcagggagtgttaccaaaatatctaccataccacataccagctttttcttgacggga agtaaagatggagatgtaaaactttgggatgccaagagtgcaaaactagtatttcattgg ccaaaattgcatgaaaggcacaccttcttgcagccaagctcccgtggctttggtggtgtg gttcaggcaggtgttacagatattcaaattgtttctcatggttttcttacttgtggtgga gatggtactgtaaaacttgtgaagctcaatgatcatttagggctgtga

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