KEGG   Solanum tuberosum (potato): 102588387
Entry
102588387         CDS       T02981                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sot03400]
    102588387
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102588387
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4_2 zf-C3HC4_4 ResIII zf-RING_5 Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 CUE UBA zf-ANAPC11 GIP1_N UBA_Rad5
Other DBs
NCBI-GeneID: 102588387
NCBI-ProteinID: XP_006356106
LinkDB
Position
Un
AA seq 1138 aa
MEMEANVEENEKNIKMIRSIIGSEIPENEILEALSQKNNNPEAAINHLLDSSTPLIVHKT
VTGTGVRISAPIKQENGEESLGCNTVSGLKVREETDLGVNEKGERKVFDGCGAKGSVGNG
LKVKEEYDVGVEEKGQKEEEKKVFNVRDFRKDFNEWLKLPENNPQIDIQKPKEEKKLEMV
KFKEEPVLGVEPLSSRPLSKHEYNRLNSSTSNRAIGGIKEKIGIEKNSLSTVVIEDGDFP
EDSDWLLVGRTVVTGLSTTKGRKLENNEIVHFSFPQLGSSNQSSHWGGSRAAIAAASSIV
RFSTKRSGEIGRLPMEWAKCLIPLVNSSKVKVFGRCVAAPVNLSLMQELVLYVSFYIHHS
VFTSCEKSSWRLDSPSQIDTTTYPLLTLFKLLKVKPFQNAEFTPDELDSRKRQLNLDSDS
NEAASVLSIAKRRKGCQQYSEPNKDEQEISEASINKLVGSVDMYDLKEMEAPDTLMCSLR
PYQKEALYWMSESEKGAGVEEASKTLHPCWAAYRICEERKIYVNIFSGEATTEFPTASNA
ARGGILADAMGLGKTVMTISLILANLGRGSPDDQEIALEDTDETECVTKRITYTDTEVSK
KAKGGTLIVCPMALLGQWKDELEAHSKPGSVSVFVHYGGDRSNDPRVIAEQDVVLTTYGV
LSATYKANNMKSIFHNVDWYRVVLDEAHTIKSWKTLGAQAAFTLSAHCRWCLTGTPLQNN
LEDLYSLLCFLHVEPWCNWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKDTKDKD
GRAILILPPTDIQVIQCTQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLR
LRQCCNHPFLVMSRSDNQEFADLDKLARRFLETNPDSSTQKAPTPAYVEEVVEGIRNGEN
TECPICLESADDPVLTPCAHRMCRECLLSSWRTPASGLCPICRQMLKKHELFTCPSTNRF
RVDVEKNWQVSSKVSKLMDCLEPIRKSGEKSIVFSQWTSFLDLLEIPLKRKQIGYLRFDG
KLSQKQRERVLKEFSETNEKTILLMSLRAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMR
IHRIGQKKTVRVRRFIVEDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3417 nt   +upstreamnt  +downstreamnt
atggaaatggaagcaaatgttgaagagaatgagaagaatatcaagatgatccgttcaata
ataggttctgaaattccagaaaatgaaattctcgaagccctttcacagaaaaacaacaat
ccagaagcagctattaaccatttgctagattcttcgacgccgttgatagttcacaagact
gttacgggcacaggggtaaggatttctgctccgataaaacaagagaatggagaagaatca
ttgggttgtaatactgtaagtgggttaaaagttagggaagaaaccgatttgggtgtcaat
gaaaagggggaaagaaaggtttttgatgggtgtggagcaaaagggtcggttggtaatggg
ctaaaagttaaagaagaatacgatgtgggtgttgaggaaaaagggcaaaaagaggaagaa
aagaaggttttcaatgtgcgggattttagaaaagacttcaatgaatggcttaagttgcct
gaaaacaacccgcaaatcgatattcagaaaccgaaagaagaaaagaaacttgaaatggtt
aagttcaaagaagaacctgtacttggtgttgaaccattgtcatcaaggcctttgtcaaaa
cacgaatacaacagactgaatagtagtactagtaatagggctattgggggaattaaagaa
aagatcggaattgagaaaaatagtcttagtactgttgtgattgaggatggggatttccct
gaagattctgattggttgttagttgggagaactgttgttactggactttcaactacaaag
ggaagaaaactggagaataatgagattgttcatttttcatttcctcagcttgggagtagt
aatcagagttcacactggggtgggtcaagagctgctattgctgctgcatcatccattgtt
aggttctcgactaaacgatcgggggagattgggcgtcttccaatggaatgggcaaaatgc
ctcattccacttgtaaattcttcaaaggtaaaggtttttggtcgatgtgttgctgcacct
gtaaatctgtccctaatgcaggagcttgtgttgtatgtaagtttctacattcaccactcg
gtgtttacaagctgtgagaagtcatcatggaggctggattctccctcacaaattgatact
acaacatatccactacttacattgttcaagttgctcaaagtcaaaccctttcagaatgct
gagttcaccccagatgagcttgattctcgtaaacgccagctcaatttagattctgattca
aatgaggctgcttcagtgttatcaattgcaaaacgaagaaagggctgccaacagtattca
gagccaaacaaggatgagcaagaaatctctgaagcatctattaacaaacttgttggttct
gtagacatgtatgacttgaaggagatggaggctcccgacacacttatgtgcagcctaagg
ccttaccagaaggaggctctttactggatgtcagaatcagagaaaggagctggtgtagag
gaagcatcaaaaactcttcatccatgttgggcagcatatcggatatgtgaagagaggaaa
atatatgtcaacattttctctggggaagcaactactgaattcccaactgcatcaaacgca
gcacgcggagggatattggcagatgcaatggggcttggaaagacggtgatgacaatttct
ctaatacttgcgaatctggggaggggtagccctgatgatcaggaaattgccttggaagac
acagatgaaactgaatgtgtaacaaaaagaatcacttatactgataccgaagtctcaaaa
aaagcaaaaggtggcactctcattgtctgtcctatggcattactaggccagtggaaggat
gaacttgaagcacattcaaagcctggtagtgtttcagtttttgttcattatggtggggac
agaagtaatgatcctagagtgatagcagaacaagatgtagtcctgacaacttatggtgtc
ttgagtgcaacttataaggctaataatatgaaaagcatatttcataatgttgattggtac
cgggtggttctggatgaggcacacaccataaaatcctggaagactcttggtgcacaggct
gcttttactttgtcagcacattgtaggtggtgtcttactggtactcctctgcagaataat
ttggaagatctttacagccttttatgtttcttgcatgtcgagccatggtgcaactgggca
tggtggaacaagttaatacagagaccttatgaaaatggtgatcagagagctctaaaattg
atcaaggccattttgaggcccctgatgttgaggagaacaaaggataccaaggacaaagat
ggaagggcgattcttattctccctccaaccgacattcaagtcattcagtgtacacaatca
gaagctgaacgtgacttctatgatgccctcttcaagagatctaaagttcaatttgatcag
tttgtggcacaaggaaaagttcttcacaactatgctaatattcttgaattactacttcga
ctgaggcagtgttgcaaccatcctttccttgtgatgagccgaagtgataatcaagaattt
gcagatttagacaaactagcaagaaggttcttggaaacaaatcctgattcatcaacacag
aaagcacctacaccagcatatgtagaagaagttgttgagggaattcgaaatggagaaaat
acggagtgtcccatatgccttgagtcagcagatgaccctgtgctaacaccatgtgcccac
agaatgtgcagagaatgccttctttcaagctggagaactccagcaagtggactttgccca
atttgcaggcaaatgctaaagaaacatgagctattcacatgtccttctacaaatcggttt
cgagttgatgttgagaagaactggcaagtatcttctaaagtttcaaagctgatggattgc
ttagaacctataagaaaatctggtgaaaaaagcattgtttttagccaatggacttcattt
cttgatcttttggaaatcccactcaaaagaaagcaaattggctacttgaggtttgatggg
aaattgtcacagaaacaaagagaaagggtcttgaaagagttcagtgagactaatgaaaaa
acaattttgttaatgtcactaagagctggaggtgttggcttgaacttaacagcagcttct
aatgtctttctcatggatccatggtggaatcctgctgttgaagaacaagcaattatgaga
attcatcgtattggtcaaaagaaaacagttcgtgttagaaggttcattgttgaggacaca
gtggaagaaagaatgcaacaagtccaagcaagaaagcaaaggatgatagctggagctttg
actgatgaagaagtgaggtctgctagaattgaagaactcaagatgcttttcagataa

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