KEGG   Solanum tuberosum (potato): 102588521
Entry
102588521         CDS       T02981                                 
Name
(RefSeq) WD repeat-containing protein 82-B
  KO
K14962  COMPASS component SWD2
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102588521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102588521
   03036 Chromosome and associated proteins [BR:sot03036]
    102588521
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102588521
Chromosome and associated proteins [BR:sot03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     102588521
    COMPASS/SET1 complex (yeast)
     102588521
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Cytochrom_D1 KNTC1_N PQQ Beta-prop_DCAF4 VPS11_N Beta-prop_WDR35_TULP_N PQQ_2 PEP5_VPS11_N DUF5812
Other DBs
NCBI-GeneID: 102588521
NCBI-ProteinID: XP_006340732
LinkDB
Position
Un
AA seq 332 aa
MAGGPTDREDKVSLETTEEILQSMEVGMTFRDYSGRISSMDFHKTSNFLVTASDDESIRL
YDVANATCLKTINSKKYGVDLVSFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
RDRVVSLSLCYRKEYFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDEQGLVFAIAF
GGYIRMFDTRYFDKGPFEIFSVGGDVSDANSVKFSNDGRLVLLTTKDGHIHVLDSSRGTH
LSTYNVQPVSSSSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTDTEPPMIK
WAPGSLMFVTGSSELSFWIPDLSKLAAYVGRK
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcaggtggaccaactgacagagaagacaaggtctcactagagaccactgaagaaatc
ctacagagcatggaagtcggcatgacatttcgcgactatagtggtagaatcagttcaatg
gatttccataagacatcaaattttctggtgacagccagtgatgatgagtccatacgtcta
tatgatgttgcaaatgcaacgtgtttgaaaactattaatagcaaaaagtacggggtcgat
ctggttagcttcacttctcatccaacaactgtaatatactcctccaagaatggttgggat
gaatctctacgacttctttcattgcatgacaacaagtacttgcggtatttcaagggtcat
cgtgacagggtcgtctctcttagcttatgctatagaaaggagtattttatctctggctca
cttgatcgaactgttctactttgggatcaaagagctgagaaatgccagggccttcttcga
gtgcaaggaagaccggctactgcttatgatgagcaaggccttgtatttgctattgctttt
ggaggatatataaggatgtttgacacacgctatttcgacaagggaccttttgaaattttc
tctgttggtggagatgtatctgatgctaacagcgttaagttcagtaacgatgggagactt
gtgcttttgacaactaaggatgggcatattcatgtgcttgattcttctcgtggcacacat
ttatcaacgtataatgtacagcccgtttcaagtagttcaacactggaggcatctttcagt
ccagaaggaatgtttgttatatcaggatcaggtgatggtagtgtttatgcttggagtgtc
cggagcggtaaagaagtagccagttggatgagtacagatactgaaccacctatgatcaag
tgggctccaggaagcttaatgtttgtgaccggttcttctgagctttcattttggatcccg
gacttgtcaaaattagcagcttatgtgggaagaaaatag

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