Solanum tuberosum (potato): 102588551
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Entry
102588551 CDS
T02981
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
102588551
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
102588551
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
102588551
NCBI-ProteinID:
XP_006364645
LinkDB
All DBs
Position
Un
AA seq
662 aa
AA seq
DB search
MGKNMQLSLLYVVEFTMVAFTLLLVVDGRRLIETPIVRLDIQTNQVTMSNGIVNVTLSIP
YGLVTSISYGGVNNLLATQNVEKNRGYWDIFWNRTTSKRARKKFLGNSFEVIMDTENQAE
ISFKSTWNASQSDELPLNSDLRFVMLRDTPGFYTYAIVERLEGWPLVYIENLRVVFKLQQ
DMFHYMAISDERQRIMPMPVDRETGKVLDYKEAVLLTNPTNPNLKGEVDDKYFYATDNKD
DRVHGWVSSTNPPVGFWMIIPNDEFRTGGPYKQDLTSHVGPTVLSIFVSRHFAGDDLVIK
FQQGEPWKKVIGPVFLYLNSNSSAMDNPTILWDDAKRRMNQEVANWPYDFPVSEEYIKSN
QRGIIRGQLLVNDSTTTLLPASNGYIGLAPPGDVGSWQRENKGYQFWTKTDAMGNFTIEN
VISGTYNLYATVLGIIGDYKYTFDVQVTPGSSIELGILVYNPPRNGDTLWEIGVPDRTAA
EFFVPTPPPEFNVHVYQNNFESIFRQYGLWEQYSVLYPENDLVYNVGTSNYSKDWFFAHV
TRNIGNKTYISTTWKIIFNLEIIDNASNYTLQMALAAAQRAELQVRFNDENVVEPHFTTG
KIGGDNAIARHGIHGLYFLYSIEVKGNLLVNGTNTIFLTQAIATNPFQGVMYDYLRLEGP
HQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaatatgcaactaagcttattatatgttgtggagtttactatggttgctttt
acattgttgttggtagttgatgggagaagattgatagaaacgccaattgttagattggat
atacaaactaaccaagtgacgatgagcaatggcattgtcaatgttacattatcaatacca
tatggtctcgttacgagcatatcatatggtggagtcaacaacttactcgcgactcaaaat
gttgaaaaaaacagagggtattgggatattttttggaatcgtacaacatctaaaagagct
cgaaaaaagttcttgggaaatagttttgaggtcattatggataccgaaaaccaggcagaa
atttcgtttaagagtacatggaatgcttctcaatctgatgaacttccattaaacagcgac
ttaaggtttgtgatgttacgagacacacctggattttatacgtatgctatcgttgaacgt
ttagaaggatggccccttgtatatatcgaaaatttaagagttgtcttcaagcttcaacaa
gacatgtttcattacatggctatctcggacgagaggcagaggatcatgccaatgccagtg
gatcgagagacggggaaggtgcttgattacaaagaagctgttcttttgacaaatccaact
aatccaaatctaaaaggagaggtggatgacaaatacttttatgcaactgataacaaagac
gatagagttcatggatgggtaagttctactaatcctccagtaggattttggatgataatt
ccgaatgatgaatttcgtactggaggaccttacaaacaagatcttacttcacatgttggt
ccaactgtactttctatatttgtaagtagacattttgctggagatgatcttgttatcaaa
tttcaacaaggagagccatggaaaaaagttattggccctgtatttctctatcttaactca
aattcttcagctatggacaatcccaccatactctgggatgatgctaagagaaggatgaat
caagaagttgcaaactggccttatgattttccagtttcggaagagtacatcaaatctaat
caaagaggaattattcgaggccaacttcttgttaacgacagcactacgactttattaccc
gcatccaacggttatataggattagcaccaccaggagatgttggatcttggcaaagagaa
aacaaaggttatcaattttggactaaaacagacgctatggggaatttcaccatagaaaat
gtcatatccggtacatataacttgtatgcaaccgtcctaggaataattggggattacaaa
tacacttttgatgtacaagttactccaggttctagtattgaattagggattttggtttat
aatcctccaagaaatggagatacactttgggaaatcggtgtaccagatcgaacagctgct
gagttcttcgttccaacgccacctccagaatttaacgtgcacgtataccaaaacaatttt
gaatcaatatttagacaatatggtttatgggaacaatatagtgttttatatcctgaaaat
gatcttgtctacaatgttgggactagcaattattcaaaagattggttttttgctcatgtt
actaggaacataggaaacaagacctatatatctaccacatggaaaatcatatttaacctt
gaaattattgacaatgcatcaaattacactctccaaatggctcttgcagcagctcaaaga
gctgaactacaagttcgtttcaacgatgaaaacgttgttgaacctcattttacgacagga
aaaatagggggagataatgcaatcgcgagacatggtattcatggattatattttctttat
agtatcgaagtaaagggcaatctacttgtaaatggaacaaacacaatttttcttacacaa
gcaatagctactaacccctttcagggagtaatgtatgattatcttcgtttagaaggacct
catcaatga
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