Solanum tuberosum (potato): 102588597
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Entry
102588597 CDS
T02981
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102588597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102588597
Membrane trafficking [BR:
sot04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102588597
Hops complex
102588597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_EML_2
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
102588597
NCBI-ProteinID:
XP_006353606
UniProt:
M1CGM0
LinkDB
All DBs
Position
Un
AA seq
952 aa
AA seq
DB search
MYQWRKFEFFEEKFSGKVPEDIAGKIQCCSSGKGRIVLGCDDGTASLLDRGLKFNYGFQA
HSSSVLFLQQLKQRNFLVTVGEDEQIASQPPAVCLKIFDLDKMEPEGTSTSSPDCIQILR
VFTNQFPEAKITSFLVLEEAPPLLLIVIGLDNGSIYCIQGDIARERIKRFKLQVDNHSDK
SQSSVTGLGFRVDGQVLQLFAVTPNTVNLFNMHTQAPTRQTLDQIGSSVTSVAMTDRSEF
IIGRPEAIYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVFDDQRTGKNTFNVYDLKNRLI
AHSIVVNEVSQMLCEWGNIILILEDKSTLCIGEKDMESKLDMLFKKNLYTVAINLVQSQQ
ADAAATAEVLRKYGDHLYSKQDFDEAMAQYIHTIGHLEPSYVIQKFLDAQRIHNLTNYLE
KLHEKGLASKDHTTLLLNCYTKLKDVEKLNEFIKSEDGVGEQKFDVETAIRVCRAANYHE
HAMSVAKKAGRHEWYLKILLEDLGRYEEALQYISSLELSQAGVTVKEYGKILIEHKPAET
VEILMRLCTEESELPKKGASSGAFISMLPSPIDFLNIFVHYPHALLEFLEKYTSKVKDSS
AQVEIHNTLLELYLSHDLDFPSISQSNIDEGGNDLASSKSVSNGKAISNKKDVNDEKGRQ
ERRRKGLTLLKSAWPSELEQPLYDVDLAIILCEMNDFKEGLLFLYEKMKLFKEVIACYMQ
VHDHEGLIACCKRLGDLGKGGDPSLWADLLKYFGELGEDCSKEVKEILTYIERDDILPPI
VVLQTLAKNPCLSLSVIKDYIARKLEHESQLIEEDRRAMEKYQEESSTMRKEIQDLRTNA
RIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRAVLETKRILEQS
SKNPDQFFQQVKSSKDGFSVIADYFGKGIISKTSNGPSEAIGSNSASSGNDF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaatggaggaagtttgaattttttgaggagaaattttctgggaaagttccagaa
gatatagccggcaagatccaatgttgttccagcggtaaaggaaggattgttttgggttgt
gatgacggcactgcttcgttattggatcgagggttgaagttcaattatggttttcaagct
cattcttcatctgtcctcttcctccaacagctcaagcaaaggaacttcttagtgactgtt
ggagaagatgagcaaatagcttctcagcccccagctgtttgtcttaaaatttttgatctt
gacaagatggagcccgagggaacaagtacatcaagtccagattgtattcaaatactgcga
gtattcaccaaccagttccctgaagcaaagatcacgtcgtttttggtgctggaagaggct
ccgccattattactcatagttatagggctggacaatggttccatctattgcattcaagga
gatatagctcgtgaacgtatcaagcgctttaagcttcaggtggataatcattcagacaaa
agccaatcctccgtcacgggtctggggttcagagtggatggtcaggtgcttcagctgttt
gctgttaccccaaatacagtgaacttgttcaacatgcatactcaagcacctacccggcag
actcttgatcagattggatctagtgtaactagtgttgcaatgactgatcgatcggagttc
attattggtcggcctgaggcgatatatttctatgaagttgatggtcgtggtccttgttgg
gcctttgaaggagagaagaaattccttgggtggtttcgtggatacctgttatgtgttttt
gatgatcaaagaactggaaagaacactttcaatgtttatgatctgaagaaccggttaatt
gcccacagtatagtggttaacgaagtttctcagatgctttgtgaatggggtaacataata
cttattttggaggacaaatcaactttatgcattggggagaaagatatggagagcaaattg
gatatgcttttcaagaagaacctttatacagttgctataaatctcgtccaaagccagcaa
gctgatgctgctgcaactgctgaagtgctgaggaaatatggcgatcacttgtacagtaaa
caagactttgatgaggctatggctcagtatatacacaccattggacatctagaaccttca
tatgtcatacaaaaatttttggatgcacagagaatccacaatctcaccaattacttggaa
aagttgcatgagaaggggcttgcctcaaaagatcataccactcttttactaaattgttac
accaaattaaaagatgttgagaagctgaatgagttcatcaaaagtgaggatggggttggg
gaacaaaagtttgatgttgagactgcaataagggtatgcagagctgccaattatcatgag
catgccatgtctgttgctaagaaagctgggaggcatgaatggtaccttaaaattttgctt
gaagatctaggcaggtatgaagaagctttacaatatatcagcagtcttgagttgagtcaa
gctggggtgacagtgaaagagtatggcaaaattcttattgagcataagccagctgaaaca
gttgagatactcatgaggctttgtacagaggaatccgaactgcccaagaagggagcatcg
agtggtgcatttatctccatgttgccttctcctattgattttcttaacatttttgtccat
tatcctcatgcacttctggagttccttgaaaaatataccagcaaagtgaaggattcatct
gctcaagtggaaattcacaacacactcctggaattgtacttgtctcatgacctggatttc
ccatcaatttcacaatctaacatagatgaaggtggaaatgatctagcatcttcaaaatca
gtatctaatgggaaggctatatcgaacaagaaagacgtaaatgatgagaaaggtcgtcaa
gagcgacgtcggaaggggctgaccttgcttaagagtgcatggccttctgaactagaacaa
ccactatatgacgttgatcttgccataattttatgcgagatgaatgactttaaagaagga
ttgttgtttctgtatgagaagatgaaacttttcaaagaagttattgcatgctacatgcag
gtacatgatcatgaaggtttgattgcatgctgcaagagattgggtgatttgggtaagggg
ggtgacccttctctttgggcagatttgttgaagtattttggtgaacttggagaagactgc
tcaaaagaagtcaaagaaatcctgacatacattgagagggatgatatcttgcctcccatt
gtggttcttcagacacttgccaaaaacccgtgcctctctctctctgttatcaaagattac
atagctcgaaagttagaacatgagtcccagttgattgaagaagaccgcagagctatggaa
aagtatcaggaagaatcatcaacaatgagaaaagagatccaggatctaagaacaaatgct
agaatttttcagcttagcaagtgtactgcttgcacattcacactagaccttcctgctgtc
cacttcatgtgtatgcactcatttcatcagcgctgccttggcgacaatgagaaagagtgc
cctgagtgtgctcccgagtacagagccgttctggaaacaaagagaatcttggaacaaagt
tccaaaaacccagaccagttcttccaacaagtcaagagctcaaaggatggattttccgta
attgctgattattttggcaaggggattatcagcaaaacgagcaacgggccttctgaagct
attggatcaaacagtgcttcttccggcaacgatttctag
DBGET
integrated database retrieval system
