KEGG   Solanum tuberosum (potato): 102588863
Entry
102588863         CDS       T02981                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA1B-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102588863
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102588863
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-RING_11 zf-RING_5 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-RING_16 zf-ANAPC11 zf-RING_4 zf-C3HC4_3 RINGv zf-RING_Vps41 zf_RING_Vps8_fungal Prok-RING_1 Rad50_zn_hook Rtf2 zf-RING_6 zf-RING-like Prok-RING_4 PHD_NSD U-box_ZFPL1 zf-Nse zf-C3HC4_5 RH_dom zf-C3HC4_4 zf-C3H2C3
Other DBs
NCBI-GeneID: 102588863
NCBI-ProteinID: XP_006343948
UniProt: A0ABQ7U5F5 M1AW79
LinkDB
Position
Un
AA seq 165 aa
MGFPVGYTDLFLPKLLVHLLTVLGFIRKFICAIFTVFGLGDFLEPEMSFPTRPESHSELH
SVSAALIRELLPVVKFSELVDPPESCAVCLYEFDGEDEIRRLTNCRHIFHRSCLDRWMDH
DQKTCPLCRTPFIPDDMQESFNERLWLASGISDFYGEYSPVAAGL
NT seq 498 nt   +upstreamnt  +downstreamnt
atgggttttccggtgggatatacggatttattcctacccaaattgttagtccacttacta
accgttctcggtttcattagaaagttcatttgcgcgattttcactgtttttggtttaggt
gatttcctcgaacctgaaatgtcgtttccgacccgacccgaatctcactcggagctccat
tcagtgtcggcggcgttgatccgggagttacttccggtggtgaagttctctgagctggtt
gacccgccggagagttgcgcagtttgtttgtacgagtttgacggagaagatgagatccga
cggttgacgaattgccggcatatttttcaccggagttgtttggaccgttggatggatcat
gatcagaaaacttgtccactttgccggacgccatttattccggacgatatgcaagagagt
tttaatgagagattatggttggcttccggcatttctgatttttacggcgagtattctccg
gtcgccgccggtttgtag

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