Solanum tuberosum (potato): 102589220
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Entry
102589220 CDS
T02981
Name
(RefSeq) Fanconi anemia group D2 protein homolog
KO
K10891
fanconi anemia group D2 protein
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102589220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102589220
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
102589220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
102589220
NCBI-ProteinID:
XP_006347854
LinkDB
All DBs
Position
Un
AA seq
1503 aa
AA seq
DB search
MVLPQNKQIGPRKRPAKLKTGFVTPFAPPNKIPKSAVANEENVPQTASESEPPKLKQSQT
VNSIEKMISVLADAGCTLINPSGPPCLPSDLHKLRNQLNSIFSSDSSLKSEFLLGLSSYV
NSPSNLRRILSPSKRDGLGSVRSDSLARVLLLVPAVQSDIQNLLLEKLPEYFDVDPAGNI
GGRSSSLCLEEDIARLILNQFRWLDFLVDSEAFTEKLFQVLSICPVHLKKEIIGSLPEII
GEKNNKTVVDSLQEMLQEDSSIIVPMLDCFSNLHLDDMLQEQVITVALSCIRTIDAEHMP
YLLRFLLLLATPTNTRRIISHIRHQLKLVGASNVWTTQQSKMKGKSVVNNAEASILDALR
TSLRFNKVICQETLNELKSLEKVQDHKVIDIWLLTLIYMNNEPLQKIVEKLLKKKILEGC
IVETMFDQCVSGNTDLTRDYLPTLLSISEYLLACKEDKVREFGVRMYTNLFKELVDSYSR
QEVLGALITHVGSGISHEVSSAMDVMVLLASKYSQELITLSSHITGILDYLETFSIENLH
KVYEVFSLLAFSAEVSTGPFGSPISNELLVIVRKQLSHPDLTYKKMGLIGTLKIVSYLGD
AKTTKHLPSSQKSNYEEALELLETSMNSCKQLPLPLIMFYDELALTLKKKALHPAIVEWT
SKHVGDFESKFLCDLDGGELMVKDLYCGLEGDLWMNLDGDISPICLNILPLVSSSLRAAS
SLQILPANFVLLSSIEGLANQGSLAGIDALLGCPIHLPSSKFFREPLWGSLSGKQKQIMI
LSLYYAANWLRELLNAFCTQAVDECNAVSQATREEITLKLFKRLRNLVFLESLLNISLKQ
CSFSLPELQPHPESLSLNQLDHNRDQEMKNENGNGNVGLSQKKKKEKKNSQASLTDGKLR
QPTIMDVLRKAGAVPTQEPSTGPSGTCSKGSAPEPSVNQPRNINMSANVDVSTAVEHVEA
QRHKFRPLLLDCFAILAFQKTQDSCCADPASELPLCLYFLRDLNKKLDYCSPRRHILVRR
MSVPPAFGEMKVIEFISKIKPLFPSLRRHLDSAVSGVRKDTDTCPDHWRTHSAFAGNPDI
PNITSFRPSGSRSVIKETLQCFGKMLNIPNVQRDRSVLSDLLEALQPISILDCFFEGMQL
IPSPGDIGYLYAGAYLFVGNIFDAACAVSFALASKVLLSLESVLVSFRTILDNDLNDIGK
DIRTGFSKELLSFLSKKLGTSAYKLLMQKCDGVNDIEDGQKVKAEVIQKLLRIYLENCQS
TSDSLSELACSVLPQVSSHRSALEDGCCFPTLCPATFYIWYRVLHEENLAMINRLVKEIS
LLEKARGGGEVEDVKCLLKKLQQSVNVVVSLVNLCKTHDKVNVRAIAVKFGGKFVDSFLK
GFGFLQGQFELHREQIIQMVRELQTATRTIQTLCSDAKGMKQTAITSKIPITKRSMERFL
FRVKELLHSTSSGCTFWMGNLKHKNLMGDVVSSQAYVDDQKDNMDNVSTENMDIDEPTDI
AGE
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggttcttccccagaacaagcaaatcggtcctcgtaaacgtccggcgaaattgaaaact
ggattcgttactccatttgctccgcccaacaaaattcccaaatccgctgtcgcaaacgag
gaaaatgttccgcaaacagcttcggaatcggaaccgccaaagttaaaacagtcacaaact
gtaaattcgattgagaaaatgatttcagttctagcggatgccggctgtacactgatcaac
ccctcgggcccaccctgtctaccgtctgatctacataagcttcggaaccaattaaacagt
atcttctcatccgattcttctttaaagtctgagttcctcctgggtctctcgtcttacgtc
aactctcccagtaaccttcggcgcattttatcaccttcaaaacgagatggacttggatca
gtacgaagtgacagcctggcaagagtactgctactggttcctgcagtccagtcagacatt
caaaacttgctgctcgaaaagcttcctgagtattttgatgtggaccctgctggaaatatt
ggagggagatcatcttctttatgtcttgaagaggacatagcaaggttgatccttaaccaa
ttccgctggcttgacttccttgtagattcagaagcatttacagaaaaactgtttcaagtg
ttatctatttgcccggttcatttgaagaaggagataattgggtccttgcccgagattatt
ggggagaaaaacaacaaaactgttgtagattcgcttcaggagatgcttcaagaggattct
tccataattgttcccatgctcgattgtttctctaaccttcatttggatgatatgttgcaa
gaacaggtcattacagtggcgttatcttgtatccgaactattgatgcggagcatatgccc
tacctattgagattcttactgcttttggctacgccaaccaatactcgtaggattatttca
cacatccgacatcaactgaaacttgttggagcatcaaatgtttggaccacacaacagagt
aagatgaagggaaagtcagtcgtcaacaatgcagaagcttcaatacttgatgccttgcga
acaagtcttcgatttaataaagtaatttgccaagagacattgaatgaactgaaaagccta
gagaaagttcaggatcataaggtcatagacatatggttgcttacgcttatatacatgaac
aacgagcctttacaaaagattgttgagaagttactgaagaagaaaattcttgagggctgt
attgtggaaactatgtttgatcaatgtgtttctgggaatacggatttgactcgggattat
cttcctaccctcctttccatttctgagtacttactggcttgcaaagaagataaagtacgg
gaattcggcgttcgcatgtacacaaatctgttcaaagagcttgtggatagttattcaagg
caggaagtccttggagcattaattactcatgtgggttctgggataagtcatgaagtgagt
tctgctatggatgtgatggtcctcctagcctcgaagtactcacaggagttgattacactt
tcttctcatataactggcatcctagattacttggagacatttagtattgaaaacctgcat
aaggtgtatgaagtcttcagccttctggcattttctgctgaagtgagtacagggcccttt
ggatctcctatttcaaatgaactactagtgattgtgagaaagcagttgagtcatcctgat
cttacttataagaagatgggcttaattggaactcttaagatagtatcctaccttggggat
gcaaaaactacgaagcatcttccatcatctcagaagtcaaattatgaggaagctttggag
ctcttggaaacatctatgaactcctgcaagcagctaccacttccattaattatgttttat
gatgaactggctttaacattgaagaaaaaagcacttcatccagccatagtggaatggaca
agcaaacatgttggggacttcgaatcaaagtttttgtgtgacctcgatggtggggagctt
atggtcaaagacttatattgtggtttggaaggagacttatggatgaacctcgacggagac
atatctcctatatgtctcaatatcttgccacttgtatcctcttctttgcgggctgcttca
tcactacaaattcttcctgcaaactttgttttgctatcttcaattgaggggttggcgaat
caaggatctcttgcaggaattgatgcacttcttggctgtcctatacaccttccttcctct
aagttcttccgtgaaccactttggggctctttaagtggaaagcaaaagcaaatcatgatt
ctatcattgtactatgctgccaattggctgcgggaactgctcaatgccttctgtactcaa
gctgtcgatgagtgcaatgcagtcagtcaagcaacaagagaggagataactcttaaacta
tttaagcggttgaggaaccttgtatttctggagagcttgctaaacatttccctcaaacaa
tgctctttttccttacctgaactccaacctcatccggagtccttgtcgctgaaccaactt
gatcataatagagatcaggagatgaagaatgagaatggtaatggtaacgttggtctatca
caaaagaagaagaaagagaagaagaacagccaagcatcacttactgatggaaaacttagg
cagccaaccatcatggatgttttgaggaaagcaggtgcagttccaacccaggaaccaagc
actggtccttctggaacgtgttctaaaggtagtgcgcctgagccatcagtgaatcaacca
cgtaatattaatatgtcagcgaatgtagatgtttctactgctgtggagcatgtcgaagca
caaagacacaaattcaggcctcttttgctggattgctttgctatcttagcttttcagaag
actcaggattcctgctgtgcagatccagcttctgagttgcccctttgtctatattttctg
agggatctaaacaaaaagctggactactgcagtccacgaaggcatatattggttagacgc
atgagtgttcctcctgcttttggtgagatgaaagtaatagagttcataagcaaaattaag
ccactatttccttcccttagaagacatttggattctgcagtatctggtgttagaaaagat
acagacacatgcccagatcattggagaactcattctgcctttgctggaaatcctgatata
cccaacattactagctttagaccatcaggttctagatctgtcataaaagagacacttcaa
tgctttggcaagatgttaaacatacctaatgttcagagagaccggtcagtactttctgat
cttctggaggcattacagccaatcagcattttagactgctttttcgaaggcatgcaattg
attccatcaccaggagatataggttatttatatgctggtgcatatttatttgttgggaat
atctttgatgcagcatgtgctgtctcatttgctttggcttccaaagtattgttaagcttg
gaatcagtacttgtgtctttccggactatcctagataacgatctcaacgatattggaaaa
gatattcgtacaggtttttcaaaagagctactttcttttctgtccaagaagctggggact
tctgcttacaaactcttgatgcaaaagtgtgatggtgttaatgacattgaagatggtcag
aaagtcaaagcagaggtaattcaaaagcttttacgaatttacttggaaaactgccagtcc
acttccgattccctaagtgagcttgcctgctctgttttgccccaggtttcatcacacaga
tctgcattggaggatggctgttgttttcctactctctgtcctgcaacattttacatttgg
taccgggtattgcatgaagaaaaccttgccatgattaaccgcttggtaaaggaaatttca
cttctggagaaagccaggggtggtggtgaagtggaagatgtcaaatgccttctgaagaaa
ctacaacaatctgttaatgtggttgtatctttagtcaatttgtgcaagacccatgataag
gtcaacgtccgtgcaattgctgtcaagtttggtgggaagtttgttgactctttcctcaaa
ggttttggcttcttacaggggcaatttgaattgcaccgtgagcaaataattcagatggtt
agagagcttcagacagcaacgagaactatccagacgctttgttcagacgcaaagggcatg
aaacaaacagcaataaccagcaaaatccccatcaccaagagatctatggagcggttctta
tttcgtgttaaggaacttcttcactcaacgtcaagtggatgcactttttggatgggcaat
ctgaagcataaaaatttgatgggggatgtagttagctcccaagcatatgtagatgatcaa
aaagacaatatggacaatgtttcaacagaaaatatggatatagatgaacccacagatatt
gctggtgaatga
DBGET
integrated database retrieval system
