Solanum tuberosum (potato): 102589238
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Entry
102589238 CDS
T02981
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102589238
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102589238
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
90S particles
Helicases
102589238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
102589238
NCBI-ProteinID:
XP_006352587
UniProt:
M1ASG6
LinkDB
All DBs
Position
Un
AA seq
487 aa
AA seq
DB search
MEEEVQVDQNFPLFSRKTKPATRKPVPAPTSIEETPKQLDKETNSGPTPSHITFSDLGLA
GWAVQTCNELGMKKPTPVQYHCIPRILSGQDVLGLAQTGSGKTAAFALPILHRLAEDPYG
VSCLVVTPTRELAFQLAEQFRALGSCLNLRCAVVVGGMDMITQTKTLMQRPHVVIATPGR
IKVLIEQNPDIPPVFSRTKFLVLDEADRVLDVGFEEELRAIFECLPKNRQTLLFSATMTS
NLQTLLELSANKAYFYEAYEGFKTVESLKQQYIFIPKNVKDVYLQYILSKIKDIGVRSAI
IFVSTCRSCQLLGLLLEELEIDAAALHSYKSQSLRLSALHKFKSGQVPILVATDVASRGL
DIPTVDLVVNYDIPRYPQDYVHRVGRTARAGRGGLAVSFVTQNDVDLIHEIEAVLGKQLE
KFDCKENEVLDDISKVYKAKRVASMKMMDDGFEEKAASRKAQKQKMQNERKGRNKKQKRG
VTKDIEV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaagtccaagtggatcaaaacttccccttattctcccggaaaactaaacct
gccactagaaaaccagttcctgctccaacctccattgaagaaaccccaaagcagcttgac
aaggagactaactctggtcctacccctagtcatatcaccttctctgacttaggcctcgct
gggtgggccgtacagacctgtaatgagctgggcatgaagaaacccactcctgtacaatat
cactgtatccccagaatactctccggacaggatgtgttaggtttagctcagaccggtagt
ggcaaaacagcagcatttgcattgcctattcttcatcgtctagctgaagatccttatggg
gtgtcctgtcttgtggttactccgacaagggagcttgcttttcagcttgccgagcagttt
cgggccttgggttcctgcttgaatttacggtgtgctgtggttgtgggaggaatggatatg
ataacccagactaaaactctgatgcaaagaccccatgtggtgatagcaactcccggaagg
attaaggttctcattgaacagaatcctgatattcccccagttttctccagaactaagttc
cttgtcttggatgaagcagatagagttctagacgtagggtttgaagaggagttgagagca
atctttgagtgtttaccgaagaatcgacaaactcttctattttctgcaacaatgaccagc
aacctacagacgctacttgagctttctgcaaacaaagcatatttctatgaggcatatgag
ggattcaagactgtagaatcacttaagcagcagtacatttttattccgaaaaatgtgaag
gatgtctatctgcaatacattttatccaaaatcaaagacataggcgttcgctctgcaatc
atttttgtttccacctgcaggagctgtcagcttttgggtttgttgttggaagaacttgaa
attgatgctgccgcgttgcattcatacaagtcccagtcactgaggctttctgcacttcat
aaattcaaatctgggcaggtcccaatattggtcgctactgatgttgcgagtcgtgggtta
gacattccaacagttgatctggtggtaaattatgacattccaaggtatccacaggattat
gttcatcgtgttgggcgtactgcaagagctggacgaggtggacttgctgtcagctttgtt
actcagaatgatgtggatctcattcatgaaatagaagccgtgcttgggaaacaattggag
aaatttgattgtaaagagaatgaggtgcttgatgacatctcaaaggtttacaaggcgaag
cgtgttgcatcaatgaagatgatggatgatgggtttgaggagaaagcagcaagtcgtaaa
gcccagaaacagaaaatgcaaaatgagagaaagggaaggaacaaaaagcagaaaagagga
gtaacaaaagatatagaagtttga
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