Solanum tuberosum (potato): 102589336
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Entry
102589336 CDS
T02981
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00906
Carotenoid biosynthesis
sot01100
Metabolic pathways
sot01110
Biosynthesis of secondary metabolites
Module
sot_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
102589336
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sot01006
]
102589336
Enzymes [BR:
sot01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
102589336
Prenyltransferases [BR:
sot01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102589336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
102589336
NCBI-ProteinID:
XP_006348183
UniProt:
M1BE35
LinkDB
All DBs
Position
Un
AA seq
438 aa
AA seq
DB search
MSVALLWVVSPNSEVLNGTGFLDSVREGNRGLESSRFPSPNRNSMWKGRFKKGGRQEWNF
GFLNADLRYSCLGRSRTENGRSFSVQSSLVASPAGEMAVSSEKKVYEVVLKQAALVKRHL
ISTEDIEVKPDIVVPGNLGLLSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVW
CRRTDELVDGPNASHITPQALDRWEARLEDIFNGRPFDMLDAALSDTVSKFPVDIQPFRD
MVEGMRMDLWKSRYNNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALG
IANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARK
FFDEAEKGVTELSSASRWPVLASLLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIA
YARSLVPPKSTSSPLAKT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgctttgttgtgggttgtttctccgaattctgaggtcttaaatgggacagga
ttcttggattcagtccgagaagggaaccggggtttggaatcatccaggttcccatctccg
aataggaattcgatgtggaaagggagattcaagaaaggtgggagacaggagtggaatttt
gggtttttaaatgcagatttgagatattcgtgtttaggaagatcaagaactgagaatgga
aggagtttttctgtacagtccagtttggtggctagtccagctggagaaatggctgtgtca
tcagagaaaaaggtgtatgaggtggtattgaagcaggcagctttagtgaagaggcatctg
atatctactgaggacatagaagtgaagccggatattgttgttccgggtaatttgggcttg
ttgagtgaagcatatgatcgttgtggcgaagtatgtgcagagtatgctaagacattttac
ttaggaaccatgctaatgactccagacagaagaagagctatctgggcaatatatgtgtgg
tgcaggagaactgatgagcttgttgatggccctaatgcatcacacataactccacaagct
ttagataggtgggaggccaggctggaagatattttcaacgggcggccatttgatatgctt
gatgcagctttatccgatactgtttccaaatttcctgttgatattcagccattcagagat
atggttgaaggaatgcgtatggacttgtggaaatccagatacaacaactttgatgagcta
tatctatattgttactatgtcgctggtacagtaggattgatgagtgttccaattatgggc
attgcacctgaatcaaaggcaacgacagagagtgtatataacgcagctttggctttaggg
atcgcaaatcaactaaccaatatactcagagatgtaggagaagatgcaagaagaggaaga
gtatacttacctcaagatgaattagcacaggcagggctctccgatgaagacatttttgct
ggaagagtgactgataagtggaggatctttatgaagaagcaaattcagagggcaaggaaa
ttctttgatgaggcagaaaaaggtgtcacagaactgagctctgctagtagatggccggtg
ttggcgtcgttgctgttatatcgcaagatactggacgagattgaagcgaacgactacaac
aacttcacaaggagggcttatgtgagcaagccaaagaagcttctgacgttgcccattgct
tatgcaagatctctagtgccccctaagtcaacttcttccccactagcaaagacatga
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